Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
ALX3O95076 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
ALX3O95076 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.39□□□□□ -0.27
ALX3O95076 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.39□□□□□ -0.27
ALX3O95076 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ALX3O95076 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 AC004461.1-201ENST00000412461 403 ntBASIC13.39□□□□□ -0.27
ALX3O95076 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.39□□□□□ -0.27
ALX3O95076 SPDYE14P-201ENST00000442619 822 ntBASIC13.39□□□□□ -0.27
ALX3O95076 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 SLED1-202ENST00000512051 380 ntBASIC13.39□□□□□ -0.27
ALX3O95076 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 AC190387.1-201ENST00000551683 408 ntBASIC13.39□□□□□ -0.27
ALX3O95076 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 AC093520.2-201ENST00000561830 333 ntBASIC13.39□□□□□ -0.27
ALX3O95076 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.39□□□□□ -0.27
ALX3O95076 AC003101.2-201ENST00000612557 442 ntBASIC13.39□□□□□ -0.27
ALX3O95076 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.39□□□□□ -0.27
ALX3O95076 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 AC152010.1-201ENST00000415779 2006 ntBASIC13.39□□□□□ -0.27
ALX3O95076 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.39□□□□□ -0.27
ALX3O95076 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ALX3O95076 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.39□□□□□ -0.27
ALX3O95076 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALX3O95076 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ALX3O95076 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
ALX3O95076 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ALX3O95076 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 POM121L4P-202ENST00000427789 1891 ntBASIC13.38□□□□□ -0.27
ALX3O95076 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.38□□□□□ -0.27
ALX3O95076 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.38□□□□□ -0.27
ALX3O95076 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.38□□□□□ -0.27
ALX3O95076 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.38□□□□□ -0.27
ALX3O95076 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ALX3O95076 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.38□□□□□ -0.27
ALX3O95076 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALX3O95076 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.38□□□□□ -0.27
ALX3O95076 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.38□□□□□ -0.27
ALX3O95076 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.38□□□□□ -0.27
ALX3O95076 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.38□□□□□ -0.27
ALX3O95076 AL079307.3-201ENST00000556114 283 ntBASIC13.38□□□□□ -0.27
ALX3O95076 AC026150.2-201ENST00000564693 1156 ntBASIC13.38□□□□□ -0.27
ALX3O95076 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
ALX3O95076 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ALX3O95076 AC009093.7-201ENST00000623853 1223 ntBASIC13.38□□□□□ -0.27
ALX3O95076 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms