Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
CEACAM4O75871 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.45□□□□□ -0.26
CEACAM4O75871 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.45□□□□□ -0.26
CEACAM4O75871 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.45□□□□□ -0.26
CEACAM4O75871 AC114501.1-201ENST00000445949 172 ntBASIC13.45□□□□□ -0.26
CEACAM4O75871 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.45□□□□□ -0.26
CEACAM4O75871 RN7SL818P-201ENST00000485099 259 ntBASIC13.45□□□□□ -0.26
CEACAM4O75871 AC114947.1-202ENST00000514136 344 ntBASIC13.45□□□□□ -0.26
CEACAM4O75871 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CEACAM4O75871 RN7SL725P-201ENST00000606439 259 ntBASIC13.45□□□□□ -0.26
CEACAM4O75871 AC007881.3-201ENST00000608897 607 ntBASIC13.45□□□□□ -0.26
CEACAM4O75871 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.45□□□□□ -0.26
CEACAM4O75871 AP001065.2-201ENST00000617205 644 ntBASIC13.45□□□□□ -0.26
CEACAM4O75871 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
CEACAM4O75871 HLA-C-210ENST00000640219 976 ntBASIC13.45□□□□□ -0.26
CEACAM4O75871 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CEACAM4O75871 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.45□□□□□ -0.26
CEACAM4O75871 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 AC009093.10-201ENST00000641956 1442 ntBASIC13.45□□□□□ -0.26
CEACAM4O75871 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.45□□□□□ -0.26
CEACAM4O75871 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CEACAM4O75871 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CEACAM4O75871 AC013726.1-201ENST00000563747 2285 ntBASIC13.44□□□□□ -0.26
CEACAM4O75871 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.44□□□□□ -0.26
CEACAM4O75871 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CEACAM4O75871 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.44□□□□□ -0.26
CEACAM4O75871 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 RNA5SP359-201ENST00000364838 113 ntBASIC13.44□□□□□ -0.26
CEACAM4O75871 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.44□□□□□ -0.26
CEACAM4O75871 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 AL627422.1-201ENST00000434104 580 ntBASIC13.44□□□□□ -0.26
CEACAM4O75871 OR2R1P-201ENST00000441404 914 ntBASIC13.44□□□□□ -0.26
CEACAM4O75871 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.44□□□□□ -0.26
CEACAM4O75871 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.44□□□□□ -0.26
CEACAM4O75871 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CEACAM4O75871 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.44□□□□□ -0.26
CEACAM4O75871 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.44□□□□□ -0.26
CEACAM4O75871 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
CEACAM4O75871 RPL17P45-201ENST00000586289 509 ntBASIC13.44□□□□□ -0.26
CEACAM4O75871 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.44□□□□□ -0.26
CEACAM4O75871 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.44□□□□□ -0.26
CEACAM4O75871 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.44□□□□□ -0.26
CEACAM4O75871 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.44□□□□□ -0.26
CEACAM4O75871 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 TMBIM7P-203ENST00000641617 1718 ntBASIC13.44□□□□□ -0.26
CEACAM4O75871 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CEACAM4O75871 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 KRT8P28-201ENST00000433288 1390 ntBASIC13.44□□□□□ -0.26
CEACAM4O75871 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM4O75871 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CEACAM4O75871 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.44□□□□□ -0.26
CEACAM4O75871 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM4O75871 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM4O75871 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM4O75871 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CEACAM4O75871 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM4O75871 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM4O75871 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM4O75871 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.43□□□□□ -0.26
CEACAM4O75871 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.43□□□□□ -0.26
CEACAM4O75871 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CEACAM4O75871 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM4O75871 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms