Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
UPK1BO75841 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 AL671277.2-201ENST00000458060 996 ntBASIC13.07□□□□□ -0.32
UPK1BO75841 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 AC098859.1-201ENST00000502915 1238 ntBASIC13.07□□□□□ -0.32
UPK1BO75841 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.07□□□□□ -0.32
UPK1BO75841 AC074051.2-201ENST00000565115 352 ntBASIC13.07□□□□□ -0.32
UPK1BO75841 AC006557.2-201ENST00000592985 1240 ntBASIC13.07□□□□□ -0.32
UPK1BO75841 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 AC008667.4-201ENST00000607370 168 ntBASIC13.07□□□□□ -0.32
UPK1BO75841 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.07□□□□□ -0.32
UPK1BO75841 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.07□□□□□ -0.32
UPK1BO75841 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
UPK1BO75841 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 AC005332.1-201ENST00000577698 1310 ntBASIC13.07□□□□□ -0.32
UPK1BO75841 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
UPK1BO75841 AGAP12P-201ENST00000585227 2359 ntBASIC13.07□□□□□ -0.32
UPK1BO75841 AC110048.1-201ENST00000604293 2157 ntBASIC13.07□□□□□ -0.32
UPK1BO75841 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.07□□□□□ -0.32
UPK1BO75841 AC016734.2-201ENST00000624325 1377 ntBASIC13.07□□□□□ -0.32
UPK1BO75841 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UPK1BO75841 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
UPK1BO75841 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
UPK1BO75841 HSPA8P5-201ENST00000456928 2069 ntBASIC13.06□□□□□ -0.32
UPK1BO75841 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
UPK1BO75841 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.06□□□□□ -0.32
UPK1BO75841 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 AC092474.2-201ENST00000424288 719 ntBASIC13.06□□□□□ -0.32
UPK1BO75841 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.06□□□□□ -0.32
UPK1BO75841 KRT16P4-201ENST00000453883 522 ntBASIC13.06□□□□□ -0.32
UPK1BO75841 AC132008.2-207ENST00000454517 770 ntBASIC13.06□□□□□ -0.32
UPK1BO75841 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 MIR193BHG-211ENST00000641433 5365 ntBASIC13.06□□□□□ -0.32
UPK1BO75841 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UPK1BO75841 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 321.7 ms