Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP2A1O14983 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ATP2A1O14983 AC079328.1-201ENST00000560358 952 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP2A1O14983 AC016629.1-201ENST00000596579 586 ntBASIC17.1■□□□□ 0.33
ATP2A1O14983 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
ATP2A1O14983 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ATP2A1O14983 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.1■□□□□ 0.33
ATP2A1O14983 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP2A1O14983 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP2A1O14983 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP2A1O14983 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP2A1O14983 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP2A1O14983 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
ATP2A1O14983 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 SSR4P1-203ENST00000599569 2260 ntBASIC17.09■□□□□ 0.33
ATP2A1O14983 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP2A1O14983 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATP2A1O14983 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ATP2A1O14983 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP2A1O14983 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP2A1O14983 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP2A1O14983 RN7SL11P-201ENST00000471305 293 ntBASIC17.09■□□□□ 0.33
ATP2A1O14983 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP2A1O14983 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.09■□□□□ 0.33
ATP2A1O14983 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.09■□□□□ 0.33
ATP2A1O14983 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP2A1O14983 AL160314.3-201ENST00000556041 767 ntBASIC17.09■□□□□ 0.33
ATP2A1O14983 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.09■□□□□ 0.33
ATP2A1O14983 RN7SL574P-201ENST00000581512 297 ntBASIC17.09■□□□□ 0.33
ATP2A1O14983 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ATP2A1O14983 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP2A1O14983 Z98259.2-201ENST00000641583 609 ntBASIC17.09■□□□□ 0.33
ATP2A1O14983 AL008718.2-201ENST00000609206 1313 ntBASIC17.09■□□□□ 0.33
ATP2A1O14983 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP2A1O14983 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP2A1O14983 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP2A1O14983 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.09■□□□□ 0.33
ATP2A1O14983 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ATP2A1O14983 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP2A1O14983 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP2A1O14983 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP2A1O14983 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP2A1O14983 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP2A1O14983 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP2A1O14983 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP2A1O14983 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP2A1O14983 SALL4P5-201ENST00000419001 1760 ntBASIC17.08■□□□□ 0.33
ATP2A1O14983 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ATP2A1O14983 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ATP2A1O14983 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 ACTG1P2-201ENST00000415776 1125 ntBASIC17.08■□□□□ 0.32
ATP2A1O14983 ACTG1P11-201ENST00000425411 1125 ntBASIC17.08■□□□□ 0.32
ATP2A1O14983 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2A1O14983 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2A1O14983 Z97180.1-201ENST00000445173 988 ntBASIC17.08■□□□□ 0.32
ATP2A1O14983 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2A1O14983 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.08■□□□□ 0.32
ATP2A1O14983 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP2A1O14983 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP2A1O14983 AC009779.1-201ENST00000551138 283 ntBASIC17.08■□□□□ 0.32
ATP2A1O14983 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.08■□□□□ 0.32
ATP2A1O14983 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2A1O14983 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ATP2A1O14983 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.08■□□□□ 0.32
ATP2A1O14983 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ATP2A1O14983 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A1O14983 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms