Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
FOXN3O00409 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXN3O00409 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXN3O00409 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXN3O00409 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXN3O00409 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FOXN3O00409 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXN3O00409 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXN3O00409 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
FOXN3O00409 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FOXN3O00409 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXN3O00409 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXN3O00409 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXN3O00409 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.05■□□□□ 0.16
FOXN3O00409 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.05■□□□□ 0.16
FOXN3O00409 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXN3O00409 MIR5189-201ENST00000577370 114 ntBASIC16.05■□□□□ 0.16
FOXN3O00409 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.05■□□□□ 0.16
FOXN3O00409 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
FOXN3O00409 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXN3O00409 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXN3O00409 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXN3O00409 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
FOXN3O00409 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FOXN3O00409 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
FOXN3O00409 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXN3O00409 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXN3O00409 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXN3O00409 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXN3O00409 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXN3O00409 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
FOXN3O00409 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FOXN3O00409 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
FOXN3O00409 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXN3O00409 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
FOXN3O00409 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXN3O00409 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
FOXN3O00409 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FOXN3O00409 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
FOXN3O00409 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 AL138725.1-201ENST00000407347 1314 ntBASIC16.04■□□□□ 0.16
FOXN3O00409 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
FOXN3O00409 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
FOXN3O00409 TLE1P1-201ENST00000422965 589 ntBASIC16.04■□□□□ 0.16
FOXN3O00409 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.04■□□□□ 0.16
FOXN3O00409 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.04■□□□□ 0.16
FOXN3O00409 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FOXN3O00409 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
FOXN3O00409 TDH-203ENST00000531764 1110 ntBASIC16.04■□□□□ 0.16
FOXN3O00409 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.04■□□□□ 0.16
FOXN3O00409 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
FOXN3O00409 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
FOXN3O00409 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXN3O00409 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
FOXN3O00409 AL138709.1-201ENST00000614840 1693 ntBASIC16.04■□□□□ 0.16
FOXN3O00409 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXN3O00409 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
FOXN3O00409 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXN3O00409 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXN3O00409 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
FOXN3O00409 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 INE2-201ENST00000630399 1874 ntBASIC16.03■□□□□ 0.16
FOXN3O00409 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
FOXN3O00409 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FOXN3O00409 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXN3O00409 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXN3O00409 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FOXN3O00409 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXN3O00409 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXN3O00409 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
FOXN3O00409 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXN3O00409 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXN3O00409 RN7SKP230-201ENST00000365642 335 ntBASIC16.03■□□□□ 0.16
FOXN3O00409 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms