Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 MROH4P-201ENST00000431302 1578 ntBASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA3F8WFD2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA3F8WFD2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 MTX1P1-201ENST00000440904 838 ntBASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 AC104306.2-201ENST00000451877 341 ntBASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 AC022616.1-201ENST00000518688 554 ntBASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 AC103810.3-201ENST00000583567 96 ntBASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 AL022328.3-201ENST00000607943 679 ntBASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms