Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1G3Q9Y6M4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 SSR4P1-203ENST00000599569 2260 ntBASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 CICP13-201ENST00000422015 2789 ntBASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 RN7SKP175-201ENST00000408472 289 ntBASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 AC005730.2-201ENST00000564549 1184 ntBASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 AC022748.3-201ENST00000621828 275 ntBASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 AC100757.4-201ENST00000626934 759 ntBASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 AC138627.1-207ENST00000641560 1006 ntBASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1G3Q9Y6M4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 AC106794.1-201ENST00000506935 792 ntBASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 RNA5SP423-201ENST00000517127 109 ntBASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1G3Q9Y6M4 TUBBP5-203ENST00000508529 1334 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 DPM3-202ENST00000368399 517 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms