Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 ECM1P1-201ENST00000604092 1279 ntBASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAI2Q9Y5P3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAI2Q9Y5P3 FGD5P1-202ENST00000614866 2498 ntBASIC15.21■□□□□ 0.02
RAI2Q9Y5P3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.21■□□□□ 0.02
RAI2Q9Y5P3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAI2Q9Y5P3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
RAI2Q9Y5P3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RAI2Q9Y5P3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAI2Q9Y5P3 AC013726.1-201ENST00000563747 2285 ntBASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 CNN2P8-201ENST00000421872 913 ntBASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 ZNF767P-206ENST00000513792 565 ntBASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 AC243960.2-201ENST00000600996 747 ntBASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI2Q9Y5P3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 CLUHP2-201ENST00000426660 1303 ntBASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 MYO15B-237ENST00000642007 4893 ntBASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 AC126755.1-201ENST00000525846 6405 ntBASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 MIR1247-201ENST00000408206 136 ntBASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 GPAA1P2-201ENST00000417923 928 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms