Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 KRT8P29-201ENST00000420409 1371 ntBASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 AC106794.1-201ENST00000506935 792 ntBASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 AC100827.2-201ENST00000563214 1194 ntBASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 AC005730.2-201ENST00000564549 1184 ntBASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 NDUFV2P1-201ENST00000596415 907 ntBASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 AC084346.2-201ENST00000607097 949 ntBASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTDP1Q9Y5B0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 LILRP1-201ENST00000444199 1370 ntBASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 RN7SKP175-201ENST00000408472 289 ntBASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 BX284668.4-201ENST00000453917 508 ntBASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 AC044849.1-201ENST00000519737 1188 ntBASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 SBF1P1-201ENST00000444527 5631 ntBASIC17.32■□□□□ 0.36
CTDP1Q9Y5B0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 MIR769-201ENST00000390225 118 ntBASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 AC008741.2-201ENST00000612792 3115 ntBASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms