Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00588Q9Y4M8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 AC009093.2-202ENST00000620513 2079 ntBASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00588Q9Y4M8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 PCDHGB8P-201ENST00000502926 1973 ntBASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 RN7SKP230-201ENST00000365642 335 ntBASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 KRT8P13-201ENST00000463294 1010 ntBASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 ATP6V0CP2-201ENST00000469409 207 ntBASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 OARD1-212ENST00000482515 832 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 AC103810.3-201ENST00000583567 96 ntBASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 AL358472.3-201ENST00000608147 415 ntBASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 DIO1-215ENST00000610607 796 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 AL138725.1-201ENST00000407347 1314 ntBASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00588Q9Y4M8 SALL4P5-201ENST00000419001 1760 ntBASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00588Q9Y4M8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms