Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 AP005117.1-202ENST00000581724 1908 ntBASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 AC073347.1-201ENST00000421633 2643 ntBASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 AC067750.1-201ENST00000608826 6545 ntBASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 POM121L8P-201ENST00000417732 1281 ntBASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 FNTAP2-201ENST00000430308 634 ntBASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 EIF3FP3-201ENST00000434851 1086 ntBASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 POM121L9P-203ENST00000441984 1285 ntBASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSX2IPQ9Y2D8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 AC092506.1-202ENST00000401022 528 ntBASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 AL008707.1-201ENST00000422498 534 ntBASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 FTLP10-202ENST00000505798 471 ntBASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 OR10B1P-201ENST00000601666 907 ntBASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 AC007663.3-201ENST00000609632 465 ntBASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.18■□□□□ 0.18
SSX2IPQ9Y2D8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 TCAF2P1-201ENST00000291129 2421 ntBASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms