Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AL118558.3-201ENST00000607414 1079 ntBASIC14.15□□□□□ -0.14
CTSFQ9UBX1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AC126177.1-201ENST00000547829 2218 ntBASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AL109954.1-202ENST00000564051 2148 ntBASIC14.15□□□□□ -0.14
CTSFQ9UBX1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AC020907.1-201ENST00000616460 1350 ntBASIC14.14□□□□□ -0.15
CTSFQ9UBX1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AC079178.1-201ENST00000420915 656 ntBASIC14.14□□□□□ -0.15
CTSFQ9UBX1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 MIR4683-201ENST00000579659 81 ntBASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AC104982.3-201ENST00000581995 514 ntBASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AC011840.2-201ENST00000563063 1520 ntBASIC14.14□□□□□ -0.15
CTSFQ9UBX1 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AC020910.5-201ENST00000623668 1865 ntBASIC14.14□□□□□ -0.15
CTSFQ9UBX1 AP000593.2-201ENST00000542775 1433 ntBASIC14.14□□□□□ -0.15
CTSFQ9UBX1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CTSFQ9UBX1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 AC009093.2-202ENST00000620513 2079 ntBASIC14.13□□□□□ -0.15
CTSFQ9UBX1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 AC022532.1-201ENST00000624563 1728 ntBASIC14.13□□□□□ -0.15
CTSFQ9UBX1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CTSFQ9UBX1 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms