Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.34□□□□□ -0.11
CCDC88CQ9P219 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 AC243960.2-201ENST00000600996 747 ntBASIC14.34□□□□□ -0.11
CCDC88CQ9P219 AC025181.2-201ENST00000606994 802 ntBASIC14.34□□□□□ -0.11
CCDC88CQ9P219 BX539320.1-201ENST00000623759 877 ntBASIC14.34□□□□□ -0.11
CCDC88CQ9P219 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 AC005730.2-201ENST00000564549 1184 ntBASIC14.34□□□□□ -0.11
CCDC88CQ9P219 DUX4L47-201ENST00000566374 394 ntBASIC14.34□□□□□ -0.11
CCDC88CQ9P219 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 AC005695.3-201ENST00000614522 232 ntBASIC14.34□□□□□ -0.11
CCDC88CQ9P219 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC88CQ9P219 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC88CQ9P219 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CCDC88CQ9P219 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
CCDC88CQ9P219 AP001267.2-201ENST00000532619 2086 ntBASIC14.33□□□□□ -0.11
CCDC88CQ9P219 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.33□□□□□ -0.11
CCDC88CQ9P219 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC88CQ9P219 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC88CQ9P219 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC88CQ9P219 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 AC006033.1-201ENST00000440505 426 ntBASIC14.33□□□□□ -0.12
CCDC88CQ9P219 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 AC004466.1-201ENST00000599515 1080 ntBASIC14.33□□□□□ -0.12
CCDC88CQ9P219 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 WASH3P-207ENST00000560956 1394 ntBASIC14.33□□□□□ -0.12
CCDC88CQ9P219 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC88CQ9P219 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC88CQ9P219 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC88CQ9P219 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC88CQ9P219 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC88CQ9P219 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC88CQ9P219 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC88CQ9P219 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC88CQ9P219 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC88CQ9P219 HLA-K-203ENST00000430151 1046 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms