Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MIR6724-3-201ENST00000622482 92 ntBASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 DERL1-201ENST00000259512 3340 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 RANBP20P-201ENST00000557256 2104 ntBASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AC079465.1-201ENST00000416046 3361 ntTSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 JMJD7-PLA2G4B-201ENST00000342159 2966 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ABCC5-202ENST00000334444 5921 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AC019069.1-201ENST00000610008 1333 ntBASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 SCN4A-201ENST00000435607 7805 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 NFASC-201ENST00000339876 10333 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 AC005154.3-201ENST00000419639 1393 ntBASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 LINC01568-207ENST00000641790 1380 ntBASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 OSBPL6-206ENST00000409045 3427 ntTSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 ZC3HC1-202ENST00000358303 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 NBPF17P-201ENST00000401087 2119 ntBASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 SERBP1P1-201ENST00000396021 1160 ntBASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 AC004987.1-201ENST00000428627 508 ntBASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 PI4KAP1-204ENST00000612579 1703 ntBASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 CDH4-201ENST00000543233 3117 ntTSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms