Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 RNU1-114P-201ENST00000365297 166 ntBASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 AC134915.1-201ENST00000426461 574 ntBASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 RPL13AP25-201ENST00000484130 612 ntBASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 AP001582.1-201ENST00000525856 295 ntBASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 AL359711.2-201ENST00000563105 872 ntBASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 AC007431.3-201ENST00000623221 587 ntBASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 BX539320.1-201ENST00000623759 877 ntBASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF3BQ9BZI7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 AL645937.2-201ENST00000396808 931 ntBASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 C1QBPP1-201ENST00000400117 770 ntBASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 ATP5G2P4-201ENST00000442175 420 ntBASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 CHCHD2P3-201ENST00000603038 451 ntBASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 AC099568.2-201ENST00000609194 695 ntBASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 PRSS30P-206ENST00000641773 873 ntBASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF3BQ9BZI7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.96■□□□□ 0.46
UPF3BQ9BZI7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 AC005840.4-201ENST00000541242 2494 ntBASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 AL139094.1-201ENST00000405549 1188 ntBASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 AC123567.1-201ENST00000548294 1261 ntBASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 AL132655.2-201ENST00000596276 594 ntBASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 AC093726.1-201ENST00000608064 963 ntBASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms