Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 AC006213.4-201ENST00000616184 634 ntBASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 RPL18AP16-201ENST00000424057 531 ntBASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 RBM14-205ENST00000443702 732 ntTSL 3 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 EEF1GP8-201ENST00000506566 1154 ntBASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 AACSP1-202ENST00000521412 1095 ntBASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 AC115618.3-201ENST00000623114 425 ntBASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
COL25A1Q9BXS0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 AC067852.2-201ENST00000590513 2313 ntBASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 IL6RP1-201ENST00000417848 1273 ntBASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 GRPEL2P1-201ENST00000453145 339 ntBASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 RN7SL148P-201ENST00000467120 279 ntBASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 BAK1P2-201ENST00000532665 631 ntBASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 RN7SL827P-201ENST00000607480 288 ntBASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL25A1Q9BXS0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms