Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 COX5BP8-201ENST00000416911 349 ntBASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 RPL13AP25-201ENST00000484130 612 ntBASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 AP001582.1-201ENST00000525856 295 ntBASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 AC120045.2-201ENST00000567334 178 ntBASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YIPF4Q9BSR8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 AC005912.2-201ENST00000619492 2400 ntBASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 C1QBPP1-201ENST00000400117 770 ntBASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 HLA-K-203ENST00000430151 1046 ntBASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 AL359711.2-201ENST00000563105 872 ntBASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 RRP7BP-205ENST00000566851 833 ntBASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 AC140912.1-201ENST00000577171 1054 ntBASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 AC093726.1-201ENST00000608064 963 ntBASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
YIPF4Q9BSR8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
YIPF4Q9BSR8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
YIPF4Q9BSR8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
YIPF4Q9BSR8 AC018442.1-201ENST00000421439 2061 ntBASIC14.21□□□□□ -0.14
YIPF4Q9BSR8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
YIPF4Q9BSR8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
YIPF4Q9BSR8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
YIPF4Q9BSR8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
YIPF4Q9BSR8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.2□□□□□ -0.14
YIPF4Q9BSR8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms