Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 MIR658-201ENST00000385210 100 ntBASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 BCRP2-202ENST00000447763 634 ntBASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 BCRP6-201ENST00000510112 632 ntBASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 BCRP7-201ENST00000511549 544 ntBASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 AC068587.3-201ENST00000526613 355 ntBASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 AL022328.1-201ENST00000610050 478 ntBASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 MIR6805-201ENST00000615055 62 ntBASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 AL023775.1-201ENST00000454907 1746 ntBASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 KRT8P44-201ENST00000441609 1350 ntBASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 AC079776.1-201ENST00000401540 1152 ntBASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 CROCCP4-201ENST00000457096 498 ntBASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
PCGF1Q9BSM1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms