Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 HLF-202ENST00000430986 1385 ntTSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.82□□□□□ -0.36
USP9XQ93008 AC092612.1-201ENST00000514501 998 ntBASIC12.82□□□□□ -0.36
USP9XQ93008 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC12.82□□□□□ -0.36
USP9XQ93008 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC12.82□□□□□ -0.36
USP9XQ93008 RN7SL357P-201ENST00000581065 298 ntBASIC12.82□□□□□ -0.36
USP9XQ93008 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
USP9XQ93008 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 AC008536.3-201ENST00000623282 1599 ntBASIC12.82□□□□□ -0.36
USP9XQ93008 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
USP9XQ93008 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
USP9XQ93008 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
USP9XQ93008 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USP9XQ93008 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
USP9XQ93008 NQO2-204ENST00000380454 851 ntTSL 2 BASIC12.81□□□□□ -0.36
USP9XQ93008 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
USP9XQ93008 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC12.81□□□□□ -0.36
USP9XQ93008 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.81□□□□□ -0.36
USP9XQ93008 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.81□□□□□ -0.36
USP9XQ93008 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.81□□□□□ -0.36
USP9XQ93008 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.81□□□□□ -0.36
USP9XQ93008 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.81□□□□□ -0.36
USP9XQ93008 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.81□□□□□ -0.36
USP9XQ93008 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
USP9XQ93008 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC12.81□□□□□ -0.36
USP9XQ93008 AP000769.1-203ENST00000637245 208 ntBASIC12.81□□□□□ -0.36
USP9XQ93008 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.81□□□□□ -0.36
USP9XQ93008 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.81□□□□□ -0.36
USP9XQ93008 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
USP9XQ93008 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
USP9XQ93008 WASH3P-207ENST00000560956 1394 ntBASIC12.81□□□□□ -0.36
USP9XQ93008 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC12.81□□□□□ -0.36
USP9XQ93008 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.81□□□□□ -0.36
USP9XQ93008 RN7SL582P-201ENST00000491078 279 ntBASIC12.81□□□□□ -0.36
USP9XQ93008 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC12.81□□□□□ -0.36
USP9XQ93008 OR5BD1P-201ENST00000532527 817 ntBASIC12.81□□□□□ -0.36
USP9XQ93008 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.81□□□□□ -0.36
USP9XQ93008 AC068831.5-201ENST00000557387 328 ntBASIC12.81□□□□□ -0.36
USP9XQ93008 AC010976.2-201ENST00000609697 852 ntBASIC12.81□□□□□ -0.36
USP9XQ93008 AC020922.4-201ENST00000621389 339 ntBASIC12.81□□□□□ -0.36
USP9XQ93008 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.81□□□□□ -0.36
USP9XQ93008 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.81□□□□□ -0.36
USP9XQ93008 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 TMBIM7P-202ENST00000641474 1516 ntBASIC12.81□□□□□ -0.36
USP9XQ93008 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
USP9XQ93008 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
USP9XQ93008 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
USP9XQ93008 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.81□□□□□ -0.36
USP9XQ93008 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.81□□□□□ -0.36
USP9XQ93008 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
USP9XQ93008 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
USP9XQ93008 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms