Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPGRQ92834 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RPGRQ92834 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RPGRQ92834 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 AL391005.1-201ENST00000623953 2435 ntBASIC18.32■□□□□ 0.52
RPGRQ92834 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 AL118508.1-201ENST00000613502 2345 ntBASIC18.32■□□□□ 0.52
RPGRQ92834 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
RPGRQ92834 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.32■□□□□ 0.52
RPGRQ92834 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.32■□□□□ 0.52
RPGRQ92834 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.32■□□□□ 0.52
RPGRQ92834 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.32■□□□□ 0.52
RPGRQ92834 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 AC079112.1-201ENST00000454972 939 ntBASIC18.32■□□□□ 0.52
RPGRQ92834 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.32■□□□□ 0.52
RPGRQ92834 AC131206.1-201ENST00000538078 1211 ntBASIC18.32■□□□□ 0.52
RPGRQ92834 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.32■□□□□ 0.52
RPGRQ92834 AL031713.1-201ENST00000564813 661 ntBASIC18.32■□□□□ 0.52
RPGRQ92834 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.32■□□□□ 0.52
RPGRQ92834 AC242376.2-201ENST00000619355 883 ntBASIC18.32■□□□□ 0.52
RPGRQ92834 YRDCP1-201ENST00000621419 643 ntBASIC18.32■□□□□ 0.52
RPGRQ92834 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.32■□□□□ 0.52
RPGRQ92834 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RPGRQ92834 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.32■□□□□ 0.52
RPGRQ92834 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPGRQ92834 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RPGRQ92834 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.32■□□□□ 0.52
RPGRQ92834 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.32■□□□□ 0.52
RPGRQ92834 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.31■□□□□ 0.52
RPGRQ92834 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPGRQ92834 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPGRQ92834 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPGRQ92834 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPGRQ92834 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPGRQ92834 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.31■□□□□ 0.52
RPGRQ92834 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPGRQ92834 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.31■□□□□ 0.52
RPGRQ92834 AL355334.1-201ENST00000417713 215 ntBASIC18.31■□□□□ 0.52
RPGRQ92834 RPL7P35-201ENST00000446943 740 ntBASIC18.31■□□□□ 0.52
RPGRQ92834 AP002803.1-201ENST00000528836 498 ntBASIC18.31■□□□□ 0.52
RPGRQ92834 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPGRQ92834 AC015909.3-201ENST00000572855 1794 ntBASIC18.31■□□□□ 0.52
RPGRQ92834 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPGRQ92834 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPGRQ92834 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.31■□□□□ 0.52
RPGRQ92834 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPGRQ92834 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.31■□□□□ 0.52
RPGRQ92834 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RPGRQ92834 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RPGRQ92834 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.3■□□□□ 0.52
RPGRQ92834 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.3■□□□□ 0.52
RPGRQ92834 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.3■□□□□ 0.52
RPGRQ92834 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.3■□□□□ 0.52
RPGRQ92834 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPGRQ92834 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.3■□□□□ 0.52
RPGRQ92834 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.3■□□□□ 0.52
RPGRQ92834 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.3■□□□□ 0.52
RPGRQ92834 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.3■□□□□ 0.52
RPGRQ92834 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.3■□□□□ 0.52
RPGRQ92834 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.3■□□□□ 0.52
RPGRQ92834 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.3■□□□□ 0.52
RPGRQ92834 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.3■□□□□ 0.52
RPGRQ92834 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.3■□□□□ 0.52
RPGRQ92834 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.3■□□□□ 0.52
RPGRQ92834 AC138894.2-201ENST00000602838 371 ntBASIC18.3■□□□□ 0.52
RPGRQ92834 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.3■□□□□ 0.52
RPGRQ92834 AP001065.2-201ENST00000617205 644 ntBASIC18.3■□□□□ 0.52
RPGRQ92834 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 HLA-C-210ENST00000640219 976 ntBASIC18.3■□□□□ 0.52
RPGRQ92834 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPGRQ92834 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.3■□□□□ 0.52
RPGRQ92834 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms