Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC026271.1-201ENST00000447794 1348 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 KRT18P42-201ENST00000505048 1255 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 RN7SKP155-201ENST00000516031 288 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 HP-215ENST00000569639 568 ntTSL 4 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AP000894.2-203ENST00000580612 439 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC005336.1-201ENST00000585431 1243 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 AC006273.1-201ENST00000606966 861 ntBASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNE2Q8WXH0 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 WIZP1-201ENST00000531444 2299 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TMED5-201ENST00000370280 750 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 ASLP1-201ENST00000428790 637 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC087163.1-201ENST00000430089 381 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 RN7SL47P-201ENST00000488710 299 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC090095.1-201ENST00000519275 871 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 NT5CP2-201ENST00000553305 561 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC106872.9-201ENST00000512437 1393 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 CD300A-201ENST00000310828 631 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AL031577.1-201ENST00000339867 399 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 KLK8-203ENST00000347619 555 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC079944.2-201ENST00000478867 734 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TBC1D3P6-201ENST00000505954 962 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AL603756.1-201ENST00000606511 2163 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AP000244.1-201ENST00000424582 201 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 KRT8P2-201ENST00000556193 944 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC103810.4-201ENST00000578601 257 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 ABHD11-AS1-202ENST00000641969 358 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AL139158.3-201ENST00000641212 1562 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 MYCNOS-202ENST00000641263 1313 ntBASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 TIPRL-201ENST00000367830 727 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC5.81□□□□□ -1.48
SYNE2Q8WXH0 LINP1-201ENST00000417112 917 ntTSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms