Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PIK3C3Q8NEB9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 REXO1L4P-201ENST00000605109 1937 ntBASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 KLF2P3-201ENST00000451977 1087 ntBASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AC025048.3-201ENST00000590609 569 ntBASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AC025181.2-201ENST00000606994 802 ntBASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AL589739.1-201ENST00000607720 493 ntBASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AC005702.4-201ENST00000618393 416 ntBASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AC093028.1-201ENST00000622998 982 ntBASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AL356585.2-201ENST00000625078 2396 ntBASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 AC099521.3-201ENST00000624251 2938 ntBASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PIK3C3Q8NEB9 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 MST1P2-201ENST00000457982 2291 ntBASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 AC107890.1-201ENST00000422478 521 ntBASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms