Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 AC136621.1-201ENST00000624017 2304 ntBASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 CNN2P8-201ENST00000421872 913 ntBASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 AC078819.1-201ENST00000547454 765 ntBASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 AC012085.1-201ENST00000548270 765 ntBASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 ECM1P1-201ENST00000604092 1279 ntBASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 AC013268.4-201ENST00000637413 2228 ntBASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 CICP4-201ENST00000447359 2812 ntBASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 AC104581.4-201ENST00000623126 3052 ntBASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AC104457.1-201ENST00000401024 814 ntBASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AC026954.1-201ENST00000429771 1293 ntBASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AC010328.2-201ENST00000597698 1111 ntBASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 ENPP7P14-201ENST00000621765 1040 ntBASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AHCYP2-201ENST00000430630 1300 ntBASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM48Q8IWZ4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms