Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.2■□□□□ 0.18
HERC6Q8IVU3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 AC239868.1-201ENST00000369385 493 ntBASIC16.19■□□□□ 0.18
HERC6Q8IVU3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 AL627389.1-201ENST00000413508 1182 ntBASIC16.19■□□□□ 0.18
HERC6Q8IVU3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 AC138696.2-201ENST00000607376 223 ntBASIC16.19■□□□□ 0.18
HERC6Q8IVU3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 YRDCP1-201ENST00000621419 643 ntBASIC16.19■□□□□ 0.18
HERC6Q8IVU3 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
HERC6Q8IVU3 AC074138.1-201ENST00000611182 1303 ntBASIC16.19■□□□□ 0.18
HERC6Q8IVU3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 AC104640.1-201ENST00000562617 2109 ntBASIC16.18■□□□□ 0.18
HERC6Q8IVU3 MBLAC2-202ENST00000514906 1936 ntBASIC16.18■□□□□ 0.18
HERC6Q8IVU3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 RPS9P1-201ENST00000419943 583 ntBASIC16.18■□□□□ 0.18
HERC6Q8IVU3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 KLF2P1-201ENST00000447438 1042 ntBASIC16.18■□□□□ 0.18
HERC6Q8IVU3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 MIR6842-201ENST00000612539 65 ntBASIC16.18■□□□□ 0.18
HERC6Q8IVU3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 AC007718.1-201ENST00000621078 280 ntBASIC16.18■□□□□ 0.18
HERC6Q8IVU3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HERC6Q8IVU3 AL008718.2-201ENST00000609206 1313 ntBASIC16.18■□□□□ 0.18
HERC6Q8IVU3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
HERC6Q8IVU3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC6Q8IVU3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.17■□□□□ 0.18
HERC6Q8IVU3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HERC6Q8IVU3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.17■□□□□ 0.18
HERC6Q8IVU3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HERC6Q8IVU3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms