Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 C2orf27AP3-201ENST00000434123 579 ntBASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 AC007274.1-201ENST00000439805 662 ntBASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 AC234783.1-201ENST00000441761 496 ntBASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 AL512343.1-201ENST00000605837 169 ntBASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 AC017083.2-201ENST00000608069 979 ntBASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 AL354718.3-201ENST00000616414 581 ntBASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 CR382287.1-201ENST00000623954 586 ntBASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 PCDHA3-202ENST00000532566 4594 ntBASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 BOLA2P3-201ENST00000404566 256 ntBASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 AC016694.1-201ENST00000434179 700 ntBASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 AL590640.2-201ENST00000457038 527 ntBASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 AC007551.1-201ENST00000457394 519 ntBASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.12■□□□□ 0.01
LYSMD3Q7Z3D4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 FGD5P1-202ENST00000614866 2498 ntBASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms