Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 TSPY25P-201ENST00000429463 745 ntBASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 LINC01165-201ENST00000445190 1623 ntBASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AP005117.1-202ENST00000581724 1908 ntBASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 Z69890.1-201ENST00000382990 339 ntBASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AL627389.1-201ENST00000413508 1182 ntBASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AC007326.1-201ENST00000604539 458 ntBASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AC092299.1-201ENST00000632679 757 ntBASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AC099398.1-201ENST00000567919 2776 ntBASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 AC018629.1-201ENST00000623381 1736 ntBASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD4Q5XG99 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms