Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 XBP1P1-201ENST00000436573 652 ntBASIC17.79■□□□□ 0.44
PDS5AQ29RF7 AC006335.1-201ENST00000445200 547 ntBASIC17.79■□□□□ 0.44
PDS5AQ29RF7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 CU633904.3-201ENST00000624042 1029 ntBASIC17.79■□□□□ 0.44
PDS5AQ29RF7 KRT8P19-201ENST00000551916 1455 ntBASIC17.79■□□□□ 0.44
PDS5AQ29RF7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 AC144831.1-201ENST00000573312 2656 ntBASIC17.79■□□□□ 0.44
PDS5AQ29RF7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 LINC00528-201ENST00000600723 2160 ntBASIC17.79■□□□□ 0.44
PDS5AQ29RF7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDS5AQ29RF7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 UPF3AP2-201ENST00000457924 1132 ntBASIC17.78■□□□□ 0.44
PDS5AQ29RF7 RN7SL769P-201ENST00000469386 295 ntBASIC17.78■□□□□ 0.44
PDS5AQ29RF7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 AL157813.1-201ENST00000612996 587 ntBASIC17.78■□□□□ 0.44
PDS5AQ29RF7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.78■□□□□ 0.44
PDS5AQ29RF7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 NAP1L6-202ENST00000641404 1222 ntBASIC17.78■□□□□ 0.44
PDS5AQ29RF7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDS5AQ29RF7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.77■□□□□ 0.44
PDS5AQ29RF7 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 RN7SL720P-201ENST00000488178 304 ntBASIC17.77■□□□□ 0.44
PDS5AQ29RF7 AC003686.1-201ENST00000550956 1034 ntBASIC17.77■□□□□ 0.44
PDS5AQ29RF7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PDS5AQ29RF7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDS5AQ29RF7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
PDS5AQ29RF7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDS5AQ29RF7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.77■□□□□ 0.43
PDS5AQ29RF7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.77■□□□□ 0.43
PDS5AQ29RF7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDS5AQ29RF7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDS5AQ29RF7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.77■□□□□ 0.43
PDS5AQ29RF7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.77■□□□□ 0.43
PDS5AQ29RF7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms