Protein–RNA interactions for Protein: Q01628

IFITM3, Interferon-induced transmembrane protein 3, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3Q01628 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
IFITM3Q01628 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFITM3Q01628 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.98□□□□□ -0.33
IFITM3Q01628 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
IFITM3Q01628 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
IFITM3Q01628 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.98□□□□□ -0.33
IFITM3Q01628 LINC00265-3P-201ENST00000447588 903 ntBASIC12.98□□□□□ -0.33
IFITM3Q01628 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFITM3Q01628 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFITM3Q01628 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.98□□□□□ -0.33
IFITM3Q01628 AL136038.3-201ENST00000561909 1096 ntBASIC12.98□□□□□ -0.33
IFITM3Q01628 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.98□□□□□ -0.33
IFITM3Q01628 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.98□□□□□ -0.33
IFITM3Q01628 AC138894.3-201ENST00000603787 634 ntBASIC12.98□□□□□ -0.33
IFITM3Q01628 AC006011.2-201ENST00000621313 1158 ntBASIC12.98□□□□□ -0.33
IFITM3Q01628 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.98□□□□□ -0.33
IFITM3Q01628 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFITM3Q01628 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFITM3Q01628 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFITM3Q01628 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.98□□□□□ -0.33
IFITM3Q01628 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.98□□□□□ -0.33
IFITM3Q01628 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
IFITM3Q01628 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.98□□□□□ -0.33
IFITM3Q01628 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
IFITM3Q01628 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.98□□□□□ -0.33
IFITM3Q01628 AC022497.1-201ENST00000624916 3691 ntBASIC12.98□□□□□ -0.33
IFITM3Q01628 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.98□□□□□ -0.33
IFITM3Q01628 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
IFITM3Q01628 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 AC010970.1-201ENST00000445125 1848 ntBASIC12.97□□□□□ -0.33
IFITM3Q01628 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.97□□□□□ -0.33
IFITM3Q01628 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.97□□□□□ -0.33
IFITM3Q01628 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
IFITM3Q01628 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.97□□□□□ -0.33
IFITM3Q01628 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
IFITM3Q01628 KRT18P27-201ENST00000427733 1299 ntBASIC12.97□□□□□ -0.33
IFITM3Q01628 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.97□□□□□ -0.33
IFITM3Q01628 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.97□□□□□ -0.33
IFITM3Q01628 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.97□□□□□ -0.33
IFITM3Q01628 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.97□□□□□ -0.33
IFITM3Q01628 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.97□□□□□ -0.33
IFITM3Q01628 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.97□□□□□ -0.33
IFITM3Q01628 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.97□□□□□ -0.33
IFITM3Q01628 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
IFITM3Q01628 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 GHET1-201ENST00000627071 1906 ntBASIC12.97□□□□□ -0.33
IFITM3Q01628 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
IFITM3Q01628 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.97□□□□□ -0.33
IFITM3Q01628 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.97□□□□□ -0.33
IFITM3Q01628 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
IFITM3Q01628 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
IFITM3Q01628 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFITM3Q01628 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
IFITM3Q01628 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
IFITM3Q01628 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFITM3Q01628 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFITM3Q01628 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
IFITM3Q01628 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFITM3Q01628 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFITM3Q01628 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms