Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.8■□□□□ 0.28
ASIC1P78348 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.8■□□□□ 0.28
ASIC1P78348 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.8■□□□□ 0.28
ASIC1P78348 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.8■□□□□ 0.28
ASIC1P78348 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 CRB3P1-201ENST00000449338 276 ntBASIC16.8■□□□□ 0.28
ASIC1P78348 KRT18P25-201ENST00000508931 1278 ntBASIC16.8■□□□□ 0.28
ASIC1P78348 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.8■□□□□ 0.28
ASIC1P78348 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.8■□□□□ 0.28
ASIC1P78348 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.8■□□□□ 0.28
ASIC1P78348 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.8■□□□□ 0.28
ASIC1P78348 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.8■□□□□ 0.28
ASIC1P78348 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.8■□□□□ 0.28
ASIC1P78348 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.8■□□□□ 0.28
ASIC1P78348 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.8■□□□□ 0.28
ASIC1P78348 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ASIC1P78348 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ASIC1P78348 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.79■□□□□ 0.28
ASIC1P78348 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.79■□□□□ 0.28
ASIC1P78348 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.79■□□□□ 0.28
ASIC1P78348 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ASIC1P78348 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.79■□□□□ 0.28
ASIC1P78348 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ASIC1P78348 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 KRT8P35-201ENST00000483942 1338 ntBASIC16.79■□□□□ 0.28
ASIC1P78348 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ASIC1P78348 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 ACKR1-201ENST00000368121 1240 ntBASIC16.79■□□□□ 0.28
ASIC1P78348 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.79■□□□□ 0.28
ASIC1P78348 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.79■□□□□ 0.28
ASIC1P78348 ACTBP8-201ENST00000403258 1108 ntBASIC16.79■□□□□ 0.28
ASIC1P78348 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ASIC1P78348 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.79■□□□□ 0.28
ASIC1P78348 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.79■□□□□ 0.28
ASIC1P78348 AC093433.1-201ENST00000458048 571 ntBASIC16.79■□□□□ 0.28
ASIC1P78348 GIMAP3P-201ENST00000495150 836 ntBASIC16.79■□□□□ 0.28
ASIC1P78348 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.79■□□□□ 0.28
ASIC1P78348 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
ASIC1P78348 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
ASIC1P78348 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.79■□□□□ 0.28
ASIC1P78348 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.79■□□□□ 0.28
ASIC1P78348 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.79■□□□□ 0.28
ASIC1P78348 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 AC097359.2-201ENST00000604992 2389 ntBASIC16.79■□□□□ 0.28
ASIC1P78348 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.79■□□□□ 0.28
ASIC1P78348 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
ASIC1P78348 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.79■□□□□ 0.28
ASIC1P78348 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 AC067750.1-201ENST00000608826 6545 ntBASIC16.79■□□□□ 0.28
ASIC1P78348 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ASIC1P78348 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 SBF1P1-201ENST00000444527 5631 ntBASIC16.78■□□□□ 0.28
ASIC1P78348 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.78■□□□□ 0.28
ASIC1P78348 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ASIC1P78348 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.78■□□□□ 0.28
ASIC1P78348 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ASIC1P78348 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ASIC1P78348 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.78■□□□□ 0.28
ASIC1P78348 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ASIC1P78348 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.78■□□□□ 0.28
ASIC1P78348 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.78■□□□□ 0.28
ASIC1P78348 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.78■□□□□ 0.28
ASIC1P78348 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ASIC1P78348 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms