Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.92■□□□□ 0.3
TPM4P67936 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.92■□□□□ 0.3
TPM4P67936 MTDHP5-201ENST00000598980 586 ntBASIC16.92■□□□□ 0.3
TPM4P67936 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.92■□□□□ 0.3
TPM4P67936 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.92■□□□□ 0.3
TPM4P67936 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TPM4P67936 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.92■□□□□ 0.3
TPM4P67936 AC005702.4-201ENST00000618393 416 ntBASIC16.92■□□□□ 0.3
TPM4P67936 AC105339.1-204ENST00000636249 355 ntBASIC16.92■□□□□ 0.3
TPM4P67936 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM4P67936 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM4P67936 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.92■□□□□ 0.3
TPM4P67936 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM4P67936 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM4P67936 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM4P67936 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM4P67936 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM4P67936 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPM4P67936 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TPM4P67936 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.92■□□□□ 0.3
TPM4P67936 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM4P67936 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.92■□□□□ 0.3
TPM4P67936 AC011474.4-201ENST00000623523 2076 ntBASIC16.92■□□□□ 0.3
TPM4P67936 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM4P67936 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPM4P67936 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM4P67936 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 MST1P2-201ENST00000457982 2291 ntBASIC16.91■□□□□ 0.3
TPM4P67936 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM4P67936 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM4P67936 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TPM4P67936 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TPM4P67936 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TPM4P67936 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TPM4P67936 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TPM4P67936 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.91■□□□□ 0.3
TPM4P67936 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM4P67936 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM4P67936 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.91■□□□□ 0.3
TPM4P67936 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM4P67936 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM4P67936 AL033527.5-202ENST00000641632 1098 ntBASIC16.91■□□□□ 0.3
TPM4P67936 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM4P67936 MBLAC2-202ENST00000514906 1936 ntBASIC16.91■□□□□ 0.3
TPM4P67936 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TPM4P67936 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.91■□□□□ 0.3
TPM4P67936 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM4P67936 AL360270.3-201ENST00000609118 1348 ntBASIC16.91■□□□□ 0.3
TPM4P67936 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
TPM4P67936 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TPM4P67936 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM4P67936 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM4P67936 FP325330.2-201ENST00000624219 5630 ntBASIC16.9■□□□□ 0.3
TPM4P67936 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TPM4P67936 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TPM4P67936 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
TPM4P67936 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM4P67936 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM4P67936 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TPM4P67936 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM4P67936 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM4P67936 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TPM4P67936 TOMM22P5-201ENST00000416399 439 ntBASIC16.9■□□□□ 0.3
TPM4P67936 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.9■□□□□ 0.3
TPM4P67936 CEND1P1-201ENST00000451006 455 ntBASIC16.9■□□□□ 0.3
TPM4P67936 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM4P67936 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.9■□□□□ 0.3
TPM4P67936 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM4P67936 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.9■□□□□ 0.3
TPM4P67936 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.9■□□□□ 0.3
TPM4P67936 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM4P67936 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM4P67936 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.9■□□□□ 0.3
TPM4P67936 AC074044.1-201ENST00000609673 707 ntBASIC16.9■□□□□ 0.3
TPM4P67936 AF228730.6-201ENST00000641497 218 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms