Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AGAP14-201ENST00000624701 2060 ntBASIC14.3□□□□□ -0.12
SKP1P63208 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.3□□□□□ -0.12
SKP1P63208 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SKP1P63208 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.3□□□□□ -0.12
SKP1P63208 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
SKP1P63208 AL354989.2-201ENST00000435838 1540 ntBASIC14.3□□□□□ -0.12
SKP1P63208 PDIA3P1-201ENST00000471856 1510 ntBASIC14.3□□□□□ -0.12
SKP1P63208 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.3□□□□□ -0.12
SKP1P63208 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SKP1P63208 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.29□□□□□ -0.12
SKP1P63208 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SKP1P63208 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SKP1P63208 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.29□□□□□ -0.12
SKP1P63208 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 IGHV3-71-201ENST00000523324 359 ntBASIC14.29□□□□□ -0.12
SKP1P63208 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.29□□□□□ -0.12
SKP1P63208 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.29□□□□□ -0.12
SKP1P63208 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.29□□□□□ -0.12
SKP1P63208 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.29□□□□□ -0.12
SKP1P63208 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.29□□□□□ -0.12
SKP1P63208 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.29□□□□□ -0.12
SKP1P63208 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.29□□□□□ -0.12
SKP1P63208 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.29□□□□□ -0.12
SKP1P63208 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.29□□□□□ -0.12
SKP1P63208 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SKP1P63208 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SKP1P63208 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.28□□□□□ -0.12
SKP1P63208 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.28□□□□□ -0.12
SKP1P63208 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.28□□□□□ -0.12
SKP1P63208 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.28□□□□□ -0.12
SKP1P63208 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.28□□□□□ -0.12
SKP1P63208 AC007969.1-201ENST00000433675 447 ntBASIC14.28□□□□□ -0.12
SKP1P63208 ATP5G2P4-201ENST00000442175 420 ntBASIC14.28□□□□□ -0.12
SKP1P63208 CTBP2P5-201ENST00000454986 1264 ntBASIC14.28□□□□□ -0.12
SKP1P63208 FO681548.1-201ENST00000455617 1132 ntBASIC14.28□□□□□ -0.12
SKP1P63208 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SKP1P63208 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.28□□□□□ -0.12
SKP1P63208 AC026434.2-201ENST00000506094 1078 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms