Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
AP1S2P56377 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S2P56377 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S2P56377 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S2P56377 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.64□□□□□ -0.07
AP1S2P56377 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.64□□□□□ -0.07
AP1S2P56377 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S2P56377 RN7SL48P-201ENST00000579283 293 ntBASIC14.64□□□□□ -0.07
AP1S2P56377 MIR3197-201ENST00000582241 73 ntBASIC14.64□□□□□ -0.07
AP1S2P56377 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 AC015936.2-201ENST00000593177 259 ntBASIC14.64□□□□□ -0.07
AP1S2P56377 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.64□□□□□ -0.07
AP1S2P56377 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.64□□□□□ -0.07
AP1S2P56377 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S2P56377 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.64□□□□□ -0.07
AP1S2P56377 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S2P56377 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S2P56377 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
AP1S2P56377 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.63□□□□□ -0.07
AP1S2P56377 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
AP1S2P56377 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
AP1S2P56377 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.63□□□□□ -0.07
AP1S2P56377 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
AP1S2P56377 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.63□□□□□ -0.07
AP1S2P56377 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.63□□□□□ -0.07
AP1S2P56377 AC245100.3-201ENST00000441281 285 ntBASIC14.63□□□□□ -0.07
AP1S2P56377 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
AP1S2P56377 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.63□□□□□ -0.07
AP1S2P56377 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.63□□□□□ -0.07
AP1S2P56377 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.63□□□□□ -0.07
AP1S2P56377 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.63□□□□□ -0.07
AP1S2P56377 AC145423.3-201ENST00000615987 467 ntBASIC14.63□□□□□ -0.07
AP1S2P56377 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
AP1S2P56377 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.63□□□□□ -0.07
AP1S2P56377 AC007686.3-201ENST00000619017 3487 ntBASIC14.63□□□□□ -0.07
AP1S2P56377 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.63□□□□□ -0.07
AP1S2P56377 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.63□□□□□ -0.07
AP1S2P56377 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.63□□□□□ -0.07
AP1S2P56377 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.63□□□□□ -0.07
AP1S2P56377 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
AP1S2P56377 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.63□□□□□ -0.07
AP1S2P56377 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
AP1S2P56377 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S2P56377 SALL4P5-201ENST00000419001 1760 ntBASIC14.62□□□□□ -0.07
AP1S2P56377 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
AP1S2P56377 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S2P56377 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.62□□□□□ -0.07
AP1S2P56377 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S2P56377 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
AP1S2P56377 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.62□□□□□ -0.07
AP1S2P56377 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S2P56377 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
AP1S2P56377 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
AP1S2P56377 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
AP1S2P56377 MSTO2P-201ENST00000314835 1709 ntBASIC14.62□□□□□ -0.07
AP1S2P56377 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.62□□□□□ -0.07
AP1S2P56377 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S2P56377 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.62□□□□□ -0.07
AP1S2P56377 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP1S2P56377 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms