Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.22■□□□□ 0.19
PSEN1P49768 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PSEN1P49768 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PSEN1P49768 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PSEN1P49768 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PSEN1P49768 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.22■□□□□ 0.19
PSEN1P49768 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PSEN1P49768 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
PSEN1P49768 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
PSEN1P49768 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PSEN1P49768 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PSEN1P49768 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PSEN1P49768 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
PSEN1P49768 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.21■□□□□ 0.19
PSEN1P49768 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
PSEN1P49768 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.21■□□□□ 0.19
PSEN1P49768 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PSEN1P49768 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PSEN1P49768 ACKR1-201ENST00000368121 1240 ntBASIC16.21■□□□□ 0.19
PSEN1P49768 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.21■□□□□ 0.19
PSEN1P49768 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 LHFPL3-AS1-202ENST00000416376 866 ntTSL 3 BASIC16.21■□□□□ 0.19
PSEN1P49768 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.21■□□□□ 0.19
PSEN1P49768 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.21■□□□□ 0.19
PSEN1P49768 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.21■□□□□ 0.19
PSEN1P49768 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.21■□□□□ 0.19
PSEN1P49768 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.21■□□□□ 0.19
PSEN1P49768 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.21■□□□□ 0.19
PSEN1P49768 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.21■□□□□ 0.19
PSEN1P49768 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PSEN1P49768 AP001981.1-201ENST00000531132 738 ntBASIC16.21■□□□□ 0.19
PSEN1P49768 AP001063.1-201ENST00000568332 529 ntBASIC16.21■□□□□ 0.19
PSEN1P49768 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.21■□□□□ 0.19
PSEN1P49768 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PSEN1P49768 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.21■□□□□ 0.19
PSEN1P49768 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.21■□□□□ 0.19
PSEN1P49768 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PSEN1P49768 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.21■□□□□ 0.19
PSEN1P49768 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PSEN1P49768 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.21■□□□□ 0.19
PSEN1P49768 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.21■□□□□ 0.19
PSEN1P49768 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 CES1P1-201ENST00000421606 1704 ntBASIC16.21■□□□□ 0.19
PSEN1P49768 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.21■□□□□ 0.19
PSEN1P49768 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSEN1P49768 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PSEN1P49768 AC243964.3-201ENST00000623022 2028 ntBASIC16.21■□□□□ 0.18
PSEN1P49768 AC092127.1-201ENST00000567093 3455 ntBASIC16.21■□□□□ 0.18
PSEN1P49768 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PSEN1P49768 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PSEN1P49768 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PSEN1P49768 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSEN1P49768 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSEN1P49768 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PSEN1P49768 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PSEN1P49768 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PSEN1P49768 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSEN1P49768 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC16.2■□□□□ 0.18
PSEN1P49768 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSEN1P49768 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PSEN1P49768 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSEN1P49768 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.2■□□□□ 0.18
PSEN1P49768 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PSEN1P49768 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC16.2■□□□□ 0.18
PSEN1P49768 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC16.2■□□□□ 0.18
PSEN1P49768 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC16.2■□□□□ 0.18
PSEN1P49768 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC16.2■□□□□ 0.18
PSEN1P49768 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.2■□□□□ 0.18
PSEN1P49768 AC016550.3-201ENST00000515706 767 ntBASIC16.2■□□□□ 0.18
PSEN1P49768 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.2■□□□□ 0.18
PSEN1P49768 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC16.2■□□□□ 0.18
PSEN1P49768 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.2■□□□□ 0.18
PSEN1P49768 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSEN1P49768 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.2■□□□□ 0.18
PSEN1P49768 AL162274.1-201ENST00000617191 1098 ntBASIC16.2■□□□□ 0.18
PSEN1P49768 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC16.2■□□□□ 0.18
PSEN1P49768 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.2■□□□□ 0.18
PSEN1P49768 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.2■□□□□ 0.18
PSEN1P49768 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms