Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.76□□□□□ -0.21
CENPAP49450 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.76□□□□□ -0.21
CENPAP49450 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CENPAP49450 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CENPAP49450 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.76□□□□□ -0.21
CENPAP49450 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CENPAP49450 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CENPAP49450 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.75□□□□□ -0.21
CENPAP49450 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.75□□□□□ -0.21
CENPAP49450 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CENPAP49450 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 AC232323.1-201ENST00000540724 2099 ntBASIC13.75□□□□□ -0.21
CENPAP49450 REXO1L5P-201ENST00000622260 2098 ntBASIC13.75□□□□□ -0.21
CENPAP49450 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.75□□□□□ -0.21
CENPAP49450 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CENPAP49450 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 TREML5P-201ENST00000421694 576 ntBASIC13.75□□□□□ -0.21
CENPAP49450 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.75□□□□□ -0.21
CENPAP49450 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.75□□□□□ -0.21
CENPAP49450 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.75□□□□□ -0.21
CENPAP49450 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.75□□□□□ -0.21
CENPAP49450 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.75□□□□□ -0.21
CENPAP49450 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CENPAP49450 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CENPAP49450 AC044860.1-202ENST00000559481 777 ntBASIC13.75□□□□□ -0.21
CENPAP49450 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CENPAP49450 AC010336.2-201ENST00000564226 506 ntBASIC13.75□□□□□ -0.21
CENPAP49450 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
CENPAP49450 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.75□□□□□ -0.21
CENPAP49450 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CENPAP49450 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.75□□□□□ -0.21
CENPAP49450 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 AL359258.3-201ENST00000622910 2331 ntBASIC13.75□□□□□ -0.21
CENPAP49450 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.75□□□□□ -0.21
CENPAP49450 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CENPAP49450 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.75□□□□□ -0.21
CENPAP49450 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CENPAP49450 AL121723.1-201ENST00000445194 1519 ntBASIC13.74□□□□□ -0.21
CENPAP49450 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CENPAP49450 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CENPAP49450 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.74□□□□□ -0.21
CENPAP49450 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.74□□□□□ -0.21
CENPAP49450 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CENPAP49450 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CENPAP49450 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CENPAP49450 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CENPAP49450 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CENPAP49450 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.74□□□□□ -0.21
CENPAP49450 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CENPAP49450 RPL13P2-201ENST00000440687 659 ntBASIC13.74□□□□□ -0.21
CENPAP49450 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.74□□□□□ -0.21
CENPAP49450 AC067863.1-201ENST00000494933 530 ntBASIC13.74□□□□□ -0.21
CENPAP49450 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.74□□□□□ -0.21
CENPAP49450 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CENPAP49450 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CENPAP49450 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 503.4 ms