Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SSR1P43307 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 BTBD7P1-201ENST00000447253 1453 ntBASIC16.1■□□□□ 0.17
SSR1P43307 AC007292.2-201ENST00000593524 1812 ntBASIC16.1■□□□□ 0.17
SSR1P43307 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.1■□□□□ 0.17
SSR1P43307 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.1■□□□□ 0.17
SSR1P43307 AC009477.1-201ENST00000452936 217 ntBASIC16.1■□□□□ 0.17
SSR1P43307 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.1■□□□□ 0.17
SSR1P43307 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 AC092337.1-201ENST00000568699 1129 ntBASIC16.1■□□□□ 0.17
SSR1P43307 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
SSR1P43307 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.1■□□□□ 0.17
SSR1P43307 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.1■□□□□ 0.17
SSR1P43307 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.1■□□□□ 0.17
SSR1P43307 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.1■□□□□ 0.17
SSR1P43307 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.1■□□□□ 0.17
SSR1P43307 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.1■□□□□ 0.17
SSR1P43307 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 AC232323.1-201ENST00000540724 2099 ntBASIC16.1■□□□□ 0.17
SSR1P43307 REXO1L5P-201ENST00000622260 2098 ntBASIC16.1■□□□□ 0.17
SSR1P43307 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SSR1P43307 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SSR1P43307 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.1■□□□□ 0.17
SSR1P43307 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSR1P43307 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSR1P43307 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSR1P43307 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SSR1P43307 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSR1P43307 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSR1P43307 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSR1P43307 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSR1P43307 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SSR1P43307 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSR1P43307 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SSR1P43307 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.09■□□□□ 0.17
SSR1P43307 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SSR1P43307 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
SSR1P43307 BASP1P1-201ENST00000430708 665 ntBASIC16.09■□□□□ 0.17
SSR1P43307 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.09■□□□□ 0.17
SSR1P43307 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.09■□□□□ 0.17
SSR1P43307 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SSR1P43307 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.09■□□□□ 0.17
SSR1P43307 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.09■□□□□ 0.17
SSR1P43307 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.09■□□□□ 0.17
SSR1P43307 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SSR1P43307 AC104794.3-201ENST00000566840 1248 ntBASIC16.09■□□□□ 0.17
SSR1P43307 SAMD11P1-201ENST00000571429 661 ntBASIC16.09■□□□□ 0.17
SSR1P43307 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.09■□□□□ 0.17
SSR1P43307 SRD5A3P1-201ENST00000603021 949 ntBASIC16.09■□□□□ 0.17
SSR1P43307 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSR1P43307 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSR1P43307 AC004840.1-201ENST00000636359 365 ntBASIC16.09■□□□□ 0.17
SSR1P43307 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SSR1P43307 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSR1P43307 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.09■□□□□ 0.17
SSR1P43307 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SSR1P43307 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSR1P43307 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.09■□□□□ 0.17
SSR1P43307 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.09■□□□□ 0.17
SSR1P43307 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SSR1P43307 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms