Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCN1P35523 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLCN1P35523 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 AL627223.1-201ENST00000416693 442 ntBASIC17.17■□□□□ 0.34
CLCN1P35523 GPS2P2-201ENST00000430745 888 ntBASIC17.17■□□□□ 0.34
CLCN1P35523 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCN1P35523 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN1P35523 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN1P35523 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.17■□□□□ 0.34
CLCN1P35523 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.17■□□□□ 0.34
CLCN1P35523 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN1P35523 AC243562.2-201ENST00000561247 970 ntBASIC17.17■□□□□ 0.34
CLCN1P35523 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN1P35523 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
CLCN1P35523 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN1P35523 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCN1P35523 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 AC005786.4-201ENST00000623369 682 ntBASIC17.17■□□□□ 0.34
CLCN1P35523 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLCN1P35523 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLCN1P35523 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN1P35523 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLCN1P35523 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLCN1P35523 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.16■□□□□ 0.34
CLCN1P35523 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CLCN1P35523 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLCN1P35523 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN1P35523 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN1P35523 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCN1P35523 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCN1P35523 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN1P35523 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCN1P35523 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCN1P35523 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCN1P35523 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCN1P35523 AC055717.3-201ENST00000622967 595 ntBASIC17.16■□□□□ 0.34
CLCN1P35523 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLCN1P35523 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCN1P35523 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCN1P35523 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLCN1P35523 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCN1P35523 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCN1P35523 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCN1P35523 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCN1P35523 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLCN1P35523 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CLCN1P35523 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLCN1P35523 KRT8P22-201ENST00000562317 1415 ntBASIC17.15■□□□□ 0.34
CLCN1P35523 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCN1P35523 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCN1P35523 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCN1P35523 AC004987.2-201ENST00000395959 1148 ntBASIC17.15■□□□□ 0.34
CLCN1P35523 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCN1P35523 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCN1P35523 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.15■□□□□ 0.34
CLCN1P35523 AP000344.2-201ENST00000512987 629 ntBASIC17.15■□□□□ 0.34
CLCN1P35523 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCN1P35523 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCN1P35523 ALG1L8P-201ENST00000533887 760 ntBASIC17.15■□□□□ 0.34
CLCN1P35523 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.15■□□□□ 0.34
CLCN1P35523 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCN1P35523 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCN1P35523 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCN1P35523 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
CLCN1P35523 AC011467.4-201ENST00000594891 528 ntBASIC17.15■□□□□ 0.34
CLCN1P35523 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCN1P35523 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN1P35523 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLCN1P35523 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLCN1P35523 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 501.9 ms