Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC051619.7-201ENST00000568314 623 ntBASIC14.68□□□□□ -0.06
EPHA3P29320 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.68□□□□□ -0.06
EPHA3P29320 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.68□□□□□ -0.06
EPHA3P29320 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
EPHA3P29320 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.68□□□□□ -0.06
EPHA3P29320 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.68□□□□□ -0.06
EPHA3P29320 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.68□□□□□ -0.06
EPHA3P29320 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
EPHA3P29320 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.68□□□□□ -0.06
EPHA3P29320 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
EPHA3P29320 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
EPHA3P29320 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
EPHA3P29320 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.67□□□□□ -0.06
EPHA3P29320 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.67□□□□□ -0.06
EPHA3P29320 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 RN7SL618P-201ENST00000477850 296 ntBASIC14.67□□□□□ -0.06
EPHA3P29320 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.67□□□□□ -0.06
EPHA3P29320 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.67□□□□□ -0.06
EPHA3P29320 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 TEX28P1-201ENST00000613479 1221 ntBASIC14.67□□□□□ -0.06
EPHA3P29320 TEX28P2-201ENST00000617764 1221 ntBASIC14.67□□□□□ -0.06
EPHA3P29320 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.67□□□□□ -0.06
EPHA3P29320 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
EPHA3P29320 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.67□□□□□ -0.06
EPHA3P29320 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.67□□□□□ -0.06
EPHA3P29320 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.67□□□□□ -0.06
EPHA3P29320 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 COL6A4P2-202ENST00000504443 2753 ntBASIC14.67□□□□□ -0.06
EPHA3P29320 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
EPHA3P29320 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EPHA3P29320 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
EPHA3P29320 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
EPHA3P29320 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
EPHA3P29320 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.66□□□□□ -0.06
EPHA3P29320 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
EPHA3P29320 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EPHA3P29320 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.66□□□□□ -0.06
EPHA3P29320 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms