Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.21■□□□□ 0.83
ATF3P18847 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATF3P18847 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.2■□□□□ 0.83
ATF3P18847 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ATF3P18847 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 F10-203ENST00000409306 1450 ntTSL 3 BASIC20.2■□□□□ 0.82
ATF3P18847 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATF3P18847 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ATF3P18847 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC20.2■□□□□ 0.82
ATF3P18847 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 RGS5-216ENST00000449680 788 ntTSL 3 BASIC20.2■□□□□ 0.82
ATF3P18847 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC20.2■□□□□ 0.82
ATF3P18847 AC010976.2-201ENST00000609697 852 ntBASIC20.2■□□□□ 0.82
ATF3P18847 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.2■□□□□ 0.82
ATF3P18847 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.2■□□□□ 0.82
ATF3P18847 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ATF3P18847 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATF3P18847 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC20.2■□□□□ 0.82
ATF3P18847 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ATF3P18847 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATF3P18847 CELP-201ENST00000411440 1249 ntTSL 5 BASIC20.19■□□□□ 0.82
ATF3P18847 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC20.19■□□□□ 0.82
ATF3P18847 AC026470.1-201ENST00000478038 846 ntBASIC20.19■□□□□ 0.82
ATF3P18847 CISD2-202ENST00000503643 808 ntTSL 2 BASIC20.19■□□□□ 0.82
ATF3P18847 AC093826.1-201ENST00000508655 993 ntBASIC20.19■□□□□ 0.82
ATF3P18847 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
ATF3P18847 TREHP1-201ENST00000531328 465 ntBASIC20.19■□□□□ 0.82
ATF3P18847 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ATF3P18847 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATF3P18847 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC20.19■□□□□ 0.82
ATF3P18847 RN7SL665P-201ENST00000578793 300 ntBASIC20.19■□□□□ 0.82
ATF3P18847 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC20.19■□□□□ 0.82
ATF3P18847 AC006483.2-201ENST00000609813 515 ntBASIC20.19■□□□□ 0.82
ATF3P18847 AL118522.1-201ENST00000611368 560 ntBASIC20.19■□□□□ 0.82
ATF3P18847 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC20.19■□□□□ 0.82
ATF3P18847 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATF3P18847 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATF3P18847 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATF3P18847 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC20.19■□□□□ 0.82
ATF3P18847 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATF3P18847 AC105250.1-201ENST00000509378 2057 ntBASIC20.18■□□□□ 0.82
ATF3P18847 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC20.18■□□□□ 0.82
ATF3P18847 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ATF3P18847 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATF3P18847 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC20.18■□□□□ 0.82
ATF3P18847 MIR1301-201ENST00000408518 82 ntBASIC20.18■□□□□ 0.82
ATF3P18847 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC20.18■□□□□ 0.82
ATF3P18847 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC20.18■□□□□ 0.82
ATF3P18847 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC20.18■□□□□ 0.82
ATF3P18847 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC20.18■□□□□ 0.82
ATF3P18847 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC20.18■□□□□ 0.82
ATF3P18847 RN7SL582P-201ENST00000491078 279 ntBASIC20.18■□□□□ 0.82
ATF3P18847 AC083801.1-201ENST00000491689 358 ntBASIC20.18■□□□□ 0.82
ATF3P18847 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC20.18■□□□□ 0.82
ATF3P18847 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC20.18■□□□□ 0.82
ATF3P18847 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC20.18■□□□□ 0.82
ATF3P18847 AC124068.2-201ENST00000569473 1109 ntBASIC20.18■□□□□ 0.82
ATF3P18847 MIR5001-201ENST00000580185 100 ntBASIC20.18■□□□□ 0.82
ATF3P18847 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC20.18■□□□□ 0.82
ATF3P18847 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
ATF3P18847 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.18■□□□□ 0.82
ATF3P18847 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC20.18■□□□□ 0.82
ATF3P18847 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC20.18■□□□□ 0.82
ATF3P18847 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.18■□□□□ 0.82
ATF3P18847 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ATF3P18847 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ATF3P18847 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC20.18■□□□□ 0.82
ATF3P18847 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 AC024909.3-201ENST00000611513 2257 ntBASIC20.18■□□□□ 0.82
ATF3P18847 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms