Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.51■□□□□ 0.23
SMPD1P17405 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.51■□□□□ 0.23
SMPD1P17405 AC078991.1-201ENST00000437297 610 ntBASIC16.51■□□□□ 0.23
SMPD1P17405 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.51■□□□□ 0.23
SMPD1P17405 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.51■□□□□ 0.23
SMPD1P17405 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.51■□□□□ 0.23
SMPD1P17405 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.51■□□□□ 0.23
SMPD1P17405 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.51■□□□□ 0.23
SMPD1P17405 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.51■□□□□ 0.23
SMPD1P17405 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMPD1P17405 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
SMPD1P17405 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMPD1P17405 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMPD1P17405 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMPD1P17405 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.51■□□□□ 0.23
SMPD1P17405 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMPD1P17405 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SMPD1P17405 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMPD1P17405 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SMPD1P17405 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.5■□□□□ 0.23
SMPD1P17405 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.5■□□□□ 0.23
SMPD1P17405 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SMPD1P17405 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMPD1P17405 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.5■□□□□ 0.23
SMPD1P17405 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.5■□□□□ 0.23
SMPD1P17405 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.5■□□□□ 0.23
SMPD1P17405 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.5■□□□□ 0.23
SMPD1P17405 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.5■□□□□ 0.23
SMPD1P17405 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.5■□□□□ 0.23
SMPD1P17405 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.5■□□□□ 0.23
SMPD1P17405 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.5■□□□□ 0.23
SMPD1P17405 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.5■□□□□ 0.23
SMPD1P17405 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.5■□□□□ 0.23
SMPD1P17405 AC138894.2-201ENST00000602838 371 ntBASIC16.5■□□□□ 0.23
SMPD1P17405 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.5■□□□□ 0.23
SMPD1P17405 YRDCP1-201ENST00000621419 643 ntBASIC16.5■□□□□ 0.23
SMPD1P17405 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.5■□□□□ 0.23
SMPD1P17405 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
SMPD1P17405 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.5■□□□□ 0.23
SMPD1P17405 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
SMPD1P17405 LINC01101-201ENST00000622953 1884 ntBASIC16.5■□□□□ 0.23
SMPD1P17405 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.5■□□□□ 0.23
SMPD1P17405 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMPD1P17405 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMPD1P17405 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.5■□□□□ 0.23
SMPD1P17405 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SMPD1P17405 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.49■□□□□ 0.23
SMPD1P17405 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.49■□□□□ 0.23
SMPD1P17405 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.49■□□□□ 0.23
SMPD1P17405 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMPD1P17405 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.49■□□□□ 0.23
SMPD1P17405 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.49■□□□□ 0.23
SMPD1P17405 PHBP15-201ENST00000574228 665 ntBASIC16.49■□□□□ 0.23
SMPD1P17405 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.49■□□□□ 0.23
SMPD1P17405 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SMPD1P17405 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.49■□□□□ 0.23
SMPD1P17405 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.49■□□□□ 0.23
SMPD1P17405 MIR6842-201ENST00000612539 65 ntBASIC16.49■□□□□ 0.23
SMPD1P17405 RN7SL736P-201ENST00000613111 269 ntBASIC16.49■□□□□ 0.23
SMPD1P17405 LINC01783-202ENST00000614408 828 ntBASIC16.49■□□□□ 0.23
SMPD1P17405 BX284668.2-205ENST00000619677 828 ntBASIC16.49■□□□□ 0.23
SMPD1P17405 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.49■□□□□ 0.23
SMPD1P17405 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.49■□□□□ 0.23
SMPD1P17405 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.49■□□□□ 0.23
SMPD1P17405 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMPD1P17405 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms