Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRKCAP17252 VDAC1P7-201ENST00000462417 847 ntBASIC14.02□□□□□ -0.17
PRKCAP17252 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PRKCAP17252 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.02□□□□□ -0.17
PRKCAP17252 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.02□□□□□ -0.17
PRKCAP17252 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.02□□□□□ -0.17
PRKCAP17252 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.02□□□□□ -0.17
PRKCAP17252 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PRKCAP17252 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRKCAP17252 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRKCAP17252 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.02□□□□□ -0.17
PRKCAP17252 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.02□□□□□ -0.17
PRKCAP17252 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PRKCAP17252 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRKCAP17252 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRKCAP17252 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRKCAP17252 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRKCAP17252 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRKCAP17252 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PRKCAP17252 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRKCAP17252 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PRKCAP17252 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.01□□□□□ -0.17
PRKCAP17252 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.01□□□□□ -0.17
PRKCAP17252 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PRKCAP17252 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PRKCAP17252 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.01□□□□□ -0.17
PRKCAP17252 MYCLP2-201ENST00000449268 967 ntBASIC14.01□□□□□ -0.17
PRKCAP17252 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 AC026410.3-201ENST00000514280 936 ntBASIC14.01□□□□□ -0.17
PRKCAP17252 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.01□□□□□ -0.17
PRKCAP17252 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.01□□□□□ -0.17
PRKCAP17252 AC092552.1-201ENST00000547243 906 ntBASIC14.01□□□□□ -0.17
PRKCAP17252 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.01□□□□□ -0.17
PRKCAP17252 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.01□□□□□ -0.17
PRKCAP17252 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.01□□□□□ -0.17
PRKCAP17252 AC140912.1-201ENST00000577171 1054 ntBASIC14.01□□□□□ -0.17
PRKCAP17252 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 AC107373.2-201ENST00000607735 490 ntBASIC14.01□□□□□ -0.17
PRKCAP17252 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
PRKCAP17252 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
PRKCAP17252 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PRKCAP17252 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PRKCAP17252 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PRKCAP17252 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PRKCAP17252 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCAP17252 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14□□□□□ -0.17
PRKCAP17252 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCAP17252 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
PRKCAP17252 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKCAP17252 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14□□□□□ -0.17
PRKCAP17252 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCAP17252 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PRKCAP17252 AGAP7P-201ENST00000582299 2062 ntBASIC14□□□□□ -0.17
PRKCAP17252 AGAP14-201ENST00000624701 2060 ntBASIC14□□□□□ -0.17
PRKCAP17252 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PRKCAP17252 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCAP17252 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PRKCAP17252 INTS4P2-202ENST00000614726 2019 ntBASIC14□□□□□ -0.17
PRKCAP17252 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14□□□□□ -0.17
PRKCAP17252 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14□□□□□ -0.17
PRKCAP17252 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCAP17252 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14□□□□□ -0.17
PRKCAP17252 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCAP17252 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKCAP17252 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PRKCAP17252 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRKCAP17252 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PRKCAP17252 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PRKCAP17252 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms