Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 ACKR1-201ENST00000368121 1240 ntBASIC13.5□□□□□ -0.25
HLA-DOBP13765 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 AC025048.6-201ENST00000634326 1161 ntBASIC13.5□□□□□ -0.25
HLA-DOBP13765 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
HLA-DOBP13765 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HLA-DOBP13765 FAM45BP-202ENST00000592932 1624 ntBASIC13.5□□□□□ -0.25
HLA-DOBP13765 AC138969.2-201ENST00000532739 9932 ntBASIC13.5□□□□□ -0.25
HLA-DOBP13765 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 KRT8P35-201ENST00000483942 1338 ntBASIC13.49□□□□□ -0.25
HLA-DOBP13765 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.49□□□□□ -0.25
HLA-DOBP13765 ACTBP8-201ENST00000403258 1108 ntBASIC13.49□□□□□ -0.25
HLA-DOBP13765 AP006294.1-201ENST00000415407 339 ntBASIC13.49□□□□□ -0.25
HLA-DOBP13765 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 AC022137.2-201ENST00000503482 481 ntBASIC13.49□□□□□ -0.25
HLA-DOBP13765 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 AC004466.1-201ENST00000599515 1080 ntBASIC13.49□□□□□ -0.25
HLA-DOBP13765 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HLA-DOBP13765 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
HLA-DOBP13765 MYO15B-237ENST00000642007 4893 ntBASIC13.48□□□□□ -0.25
HLA-DOBP13765 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 AC007191.1-201ENST00000623179 2995 ntBASIC13.48□□□□□ -0.25
HLA-DOBP13765 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 AC018665.1-201ENST00000622927 1362 ntBASIC13.48□□□□□ -0.25
HLA-DOBP13765 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DOBP13765 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DOBP13765 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms