Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
THBS1P07996 AC098850.1-201ENST00000419919 790 ntBASIC13.86□□□□□ -0.19
THBS1P07996 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.86□□□□□ -0.19
THBS1P07996 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 MYCLP2-201ENST00000449268 967 ntBASIC13.86□□□□□ -0.19
THBS1P07996 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 RN7SL692P-201ENST00000464677 288 ntBASIC13.86□□□□□ -0.19
THBS1P07996 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.86□□□□□ -0.19
THBS1P07996 AC026434.2-201ENST00000506094 1078 ntBASIC13.86□□□□□ -0.19
THBS1P07996 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.86□□□□□ -0.19
THBS1P07996 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.86□□□□□ -0.19
THBS1P07996 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.86□□□□□ -0.19
THBS1P07996 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.86□□□□□ -0.19
THBS1P07996 AC005252.2-201ENST00000624630 1141 ntBASIC13.86□□□□□ -0.19
THBS1P07996 AC022726.2-201ENST00000634673 547 ntBASIC13.86□□□□□ -0.19
THBS1P07996 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 CU639417.3-201ENST00000624240 1404 ntBASIC13.86□□□□□ -0.19
THBS1P07996 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
THBS1P07996 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.86□□□□□ -0.19
THBS1P07996 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
THBS1P07996 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
THBS1P07996 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 LRRC59-203ENST00000576448 1531 ntBASIC13.85□□□□□ -0.19
THBS1P07996 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.85□□□□□ -0.19
THBS1P07996 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
THBS1P07996 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
THBS1P07996 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
THBS1P07996 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
THBS1P07996 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.85□□□□□ -0.19
THBS1P07996 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
THBS1P07996 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.85□□□□□ -0.19
THBS1P07996 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
THBS1P07996 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 EIF3FP3-201ENST00000434851 1086 ntBASIC13.85□□□□□ -0.19
THBS1P07996 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.85□□□□□ -0.19
THBS1P07996 AL162726.2-201ENST00000438986 1017 ntBASIC13.85□□□□□ -0.19
THBS1P07996 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.85□□□□□ -0.19
THBS1P07996 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms