Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CHGBP05060 AC015656.1-201ENST00000624209 3578 ntBASIC17.96■□□□□ 0.47
CHGBP05060 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CHGBP05060 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.96■□□□□ 0.47
CHGBP05060 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.96■□□□□ 0.47
CHGBP05060 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.96■□□□□ 0.47
CHGBP05060 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.96■□□□□ 0.47
CHGBP05060 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.96■□□□□ 0.47
CHGBP05060 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CHGBP05060 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.96■□□□□ 0.47
CHGBP05060 AC005730.2-201ENST00000564549 1184 ntBASIC17.96■□□□□ 0.47
CHGBP05060 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CHGBP05060 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CHGBP05060 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.96■□□□□ 0.47
CHGBP05060 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHGBP05060 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CHGBP05060 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 E2F3P2-201ENST00000447755 1422 ntBASIC17.96■□□□□ 0.47
CHGBP05060 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHGBP05060 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CHGBP05060 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHGBP05060 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHGBP05060 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHGBP05060 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.96■□□□□ 0.46
CHGBP05060 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.96■□□□□ 0.46
CHGBP05060 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHGBP05060 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHGBP05060 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.95■□□□□ 0.46
CHGBP05060 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.95■□□□□ 0.46
CHGBP05060 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CHGBP05060 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
CHGBP05060 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.95■□□□□ 0.46
CHGBP05060 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CHGBP05060 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.95■□□□□ 0.46
CHGBP05060 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.95■□□□□ 0.46
CHGBP05060 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
CHGBP05060 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.95■□□□□ 0.46
CHGBP05060 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.95■□□□□ 0.46
CHGBP05060 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.95■□□□□ 0.46
CHGBP05060 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.95■□□□□ 0.46
CHGBP05060 AC002472.3-201ENST00000640124 621 ntBASIC17.95■□□□□ 0.46
CHGBP05060 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.95■□□□□ 0.46
CHGBP05060 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHGBP05060 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CHGBP05060 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.95■□□□□ 0.46
CHGBP05060 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.95■□□□□ 0.46
CHGBP05060 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 TUBB1P2-201ENST00000422712 1306 ntBASIC17.95■□□□□ 0.46
CHGBP05060 TUBB1P1-201ENST00000503144 1300 ntBASIC17.95■□□□□ 0.46
CHGBP05060 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHGBP05060 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.95■□□□□ 0.46
CHGBP05060 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.94■□□□□ 0.46
CHGBP05060 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.94■□□□□ 0.46
CHGBP05060 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.94■□□□□ 0.46
CHGBP05060 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.94■□□□□ 0.46
CHGBP05060 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.94■□□□□ 0.46
CHGBP05060 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.94■□□□□ 0.46
CHGBP05060 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHGBP05060 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.94■□□□□ 0.46
CHGBP05060 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms