Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.34■□□□□ 0.69
LTN1O94822 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LTN1O94822 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.34■□□□□ 0.69
LTN1O94822 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LTN1O94822 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC19.34■□□□□ 0.69
LTN1O94822 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC19.34■□□□□ 0.69
LTN1O94822 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 AC092638.2-201ENST00000441105 947 ntBASIC19.34■□□□□ 0.69
LTN1O94822 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC19.34■□□□□ 0.69
LTN1O94822 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC19.34■□□□□ 0.69
LTN1O94822 ALG1L13P-202ENST00000519320 584 ntBASIC19.34■□□□□ 0.69
LTN1O94822 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
LTN1O94822 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC19.34■□□□□ 0.69
LTN1O94822 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC19.34■□□□□ 0.69
LTN1O94822 AL591471.1-201ENST00000621855 229 ntBASIC19.34■□□□□ 0.69
LTN1O94822 AC009084.3-201ENST00000623356 437 ntBASIC19.34■□□□□ 0.69
LTN1O94822 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
LTN1O94822 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LTN1O94822 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC19.34■□□□□ 0.69
LTN1O94822 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
LTN1O94822 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LTN1O94822 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LTN1O94822 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LTN1O94822 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LTN1O94822 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LTN1O94822 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LTN1O94822 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC19.33■□□□□ 0.68
LTN1O94822 LINC00634-202ENST00000505157 222 ntBASIC19.33■□□□□ 0.68
LTN1O94822 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC19.33■□□□□ 0.68
LTN1O94822 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC19.33■□□□□ 0.68
LTN1O94822 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC19.33■□□□□ 0.68
LTN1O94822 AC138466.5-201ENST00000624002 808 ntBASIC19.33■□□□□ 0.68
LTN1O94822 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LTN1O94822 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LTN1O94822 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
LTN1O94822 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.33■□□□□ 0.68
LTN1O94822 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC19.33■□□□□ 0.68
LTN1O94822 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LTN1O94822 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LTN1O94822 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LTN1O94822 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LTN1O94822 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LTN1O94822 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
LTN1O94822 AGGF1P1-201ENST00000509500 2073 ntBASIC19.32■□□□□ 0.68
LTN1O94822 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTN1O94822 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTN1O94822 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC19.32■□□□□ 0.68
LTN1O94822 AP000911.2-201ENST00000534330 502 ntBASIC19.32■□□□□ 0.68
LTN1O94822 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC19.32■□□□□ 0.68
LTN1O94822 TP53-221ENST00000615910 1149 ntTSL 5 BASIC19.32■□□□□ 0.68
LTN1O94822 AC067931.2-201ENST00000623655 2003 ntBASIC19.32■□□□□ 0.68
LTN1O94822 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTN1O94822 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LTN1O94822 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.32■□□□□ 0.68
LTN1O94822 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTN1O94822 AC018442.1-201ENST00000421439 2061 ntBASIC19.32■□□□□ 0.68
LTN1O94822 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LTN1O94822 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.32■□□□□ 0.68
LTN1O94822 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
LTN1O94822 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTN1O94822 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTN1O94822 LAP3P2-201ENST00000454686 1454 ntBASIC19.32■□□□□ 0.68
LTN1O94822 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LTN1O94822 AL592076.1-201ENST00000424448 303 ntBASIC19.32■□□□□ 0.68
LTN1O94822 AL139008.1-201ENST00000437894 228 ntBASIC19.32■□□□□ 0.68
LTN1O94822 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LTN1O94822 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LTN1O94822 KLF17P1-201ENST00000547105 1126 ntBASIC19.32■□□□□ 0.68
LTN1O94822 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC19.32■□□□□ 0.68
LTN1O94822 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC19.32■□□□□ 0.68
LTN1O94822 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC19.32■□□□□ 0.68
LTN1O94822 SIGLEC22P-201ENST00000599104 714 ntBASIC19.32■□□□□ 0.68
LTN1O94822 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC19.32■□□□□ 0.68
LTN1O94822 AC002044.2-201ENST00000624910 970 ntBASIC19.32■□□□□ 0.68
LTN1O94822 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTN1O94822 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LTN1O94822 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTN1O94822 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC19.31■□□□□ 0.68
LTN1O94822 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTN1O94822 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LTN1O94822 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTN1O94822 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTN1O94822 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC19.31■□□□□ 0.68
LTN1O94822 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTN1O94822 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LTN1O94822 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.31■□□□□ 0.68
LTN1O94822 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
LTN1O94822 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.31■□□□□ 0.68
LTN1O94822 STK16-203ENST00000409516 895 ntTSL 2 BASIC19.31■□□□□ 0.68
LTN1O94822 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.31■□□□□ 0.68
LTN1O94822 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC19.31■□□□□ 0.68
LTN1O94822 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms