Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.05■□□□□ -0
SHOX2O60902 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.05■□□□□ -0
SHOX2O60902 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.05■□□□□ -0
SHOX2O60902 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.05■□□□□ -0
SHOX2O60902 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHOX2O60902 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHOX2O60902 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC15.05■□□□□ -0
SHOX2O60902 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHOX2O60902 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC15.05■□□□□ -0
SHOX2O60902 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHOX2O60902 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC15.05■□□□□ -0
SHOX2O60902 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
SHOX2O60902 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHOX2O60902 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SHOX2O60902 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHOX2O60902 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.05■□□□□ -0
SHOX2O60902 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.04■□□□□ -0
SHOX2O60902 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHOX2O60902 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHOX2O60902 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC15.04■□□□□ -0
SHOX2O60902 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHOX2O60902 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SHOX2O60902 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.04■□□□□ -0
SHOX2O60902 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SHOX2O60902 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.04■□□□□ -0
SHOX2O60902 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHOX2O60902 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SHOX2O60902 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SHOX2O60902 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.04■□□□□ -0
SHOX2O60902 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.04■□□□□ -0
SHOX2O60902 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.04■□□□□ -0
SHOX2O60902 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.04■□□□□ -0
SHOX2O60902 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.04■□□□□ -0
SHOX2O60902 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SHOX2O60902 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
SHOX2O60902 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHOX2O60902 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.04■□□□□ -0
SHOX2O60902 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.04■□□□□ -0
SHOX2O60902 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SHOX2O60902 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.04■□□□□ -0
SHOX2O60902 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
SHOX2O60902 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHOX2O60902 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.04■□□□□ -0
SHOX2O60902 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHOX2O60902 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC15.04■□□□□ -0
SHOX2O60902 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC15.04■□□□□ -0
SHOX2O60902 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHOX2O60902 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SHOX2O60902 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.03■□□□□ -0
SHOX2O60902 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.03■□□□□ -0
SHOX2O60902 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SHOX2O60902 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.03■□□□□ -0
SHOX2O60902 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.03■□□□□ -0
SHOX2O60902 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.03■□□□□ -0
SHOX2O60902 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
SHOX2O60902 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.03■□□□□ -0
SHOX2O60902 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.03■□□□□ -0
SHOX2O60902 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.03■□□□□ -0
SHOX2O60902 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.03■□□□□ -0
SHOX2O60902 IGLL3P-201ENST00000412472 434 ntBASIC15.03■□□□□ -0
SHOX2O60902 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.03■□□□□ -0
SHOX2O60902 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.03■□□□□ -0
SHOX2O60902 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.03■□□□□ -0
SHOX2O60902 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.03■□□□□ -0
SHOX2O60902 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.03■□□□□ -0
SHOX2O60902 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.03■□□□□ -0
SHOX2O60902 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.03■□□□□ -0
SHOX2O60902 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC15.03■□□□□ -0
SHOX2O60902 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SHOX2O60902 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SHOX2O60902 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC15.03■□□□□ -0
SHOX2O60902 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.03■□□□□ -0
SHOX2O60902 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.03■□□□□ -0
SHOX2O60902 AL355102.3-201ENST00000554299 1678 ntBASIC15.03■□□□□ -0
SHOX2O60902 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHOX2O60902 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SHOX2O60902 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
SHOX2O60902 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SHOX2O60902 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHOX2O60902 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHOX2O60902 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHOX2O60902 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms