Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
KDELR3O43731 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.18■□□□□ 0.02
KDELR3O43731 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.18■□□□□ 0.02
KDELR3O43731 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KDELR3O43731 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.18■□□□□ 0.02
KDELR3O43731 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KDELR3O43731 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.18■□□□□ 0.02
KDELR3O43731 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.18■□□□□ 0.02
KDELR3O43731 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.18■□□□□ 0.02
KDELR3O43731 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.18■□□□□ 0.02
KDELR3O43731 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
KDELR3O43731 RN7SL560P-201ENST00000577943 264 ntBASIC15.18■□□□□ 0.02
KDELR3O43731 EEF1DP1-201ENST00000585891 896 ntBASIC15.18■□□□□ 0.02
KDELR3O43731 AL358472.3-201ENST00000608147 415 ntBASIC15.18■□□□□ 0.02
KDELR3O43731 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.18■□□□□ 0.02
KDELR3O43731 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.18■□□□□ 0.02
KDELR3O43731 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.18■□□□□ 0.02
KDELR3O43731 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
KDELR3O43731 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.18■□□□□ 0.02
KDELR3O43731 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.18■□□□□ 0.02
KDELR3O43731 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
KDELR3O43731 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KDELR3O43731 MRPL37P1-201ENST00000592451 1337 ntBASIC15.17■□□□□ 0.02
KDELR3O43731 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 AC063926.3-201ENST00000624734 5658 ntBASIC15.17■□□□□ 0.02
KDELR3O43731 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
KDELR3O43731 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KDELR3O43731 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KDELR3O43731 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
KDELR3O43731 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.17■□□□□ 0.02
KDELR3O43731 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 HIST2H2BB-201ENST00000449108 381 ntBASIC15.17■□□□□ 0.02
KDELR3O43731 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.17■□□□□ 0.02
KDELR3O43731 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.17■□□□□ 0.02
KDELR3O43731 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KDELR3O43731 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.17■□□□□ 0.02
KDELR3O43731 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.17■□□□□ 0.02
KDELR3O43731 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 AP002414.2-201ENST00000591780 3365 ntBASIC15.17■□□□□ 0.02
KDELR3O43731 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KDELR3O43731 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
KDELR3O43731 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 AC023824.1-201ENST00000562945 2975 ntBASIC15.16■□□□□ 0.02
KDELR3O43731 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 AC092135.3-201ENST00000624151 1846 ntBASIC15.16■□□□□ 0.02
KDELR3O43731 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.16■□□□□ 0.02
KDELR3O43731 AC079178.1-201ENST00000420915 656 ntBASIC15.16■□□□□ 0.02
KDELR3O43731 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KDELR3O43731 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KDELR3O43731 RPL13AP20-201ENST00000459725 609 ntBASIC15.16■□□□□ 0.02
KDELR3O43731 AC100850.1-201ENST00000506768 649 ntBASIC15.16■□□□□ 0.02
KDELR3O43731 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.16■□□□□ 0.02
KDELR3O43731 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.16■□□□□ 0.02
KDELR3O43731 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.16■□□□□ 0.02
KDELR3O43731 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.16■□□□□ 0.02
KDELR3O43731 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.16■□□□□ 0.02
KDELR3O43731 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms