Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC14.31□□□□□ -0.12
CASQ2O14958 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CASQ2O14958 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CASQ2O14958 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.31□□□□□ -0.12
CASQ2O14958 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CASQ2O14958 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CASQ2O14958 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.31□□□□□ -0.12
CASQ2O14958 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CASQ2O14958 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CASQ2O14958 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.31□□□□□ -0.12
CASQ2O14958 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CASQ2O14958 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.31□□□□□ -0.12
CASQ2O14958 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.31□□□□□ -0.12
CASQ2O14958 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.31□□□□□ -0.12
CASQ2O14958 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CASQ2O14958 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.31□□□□□ -0.12
CASQ2O14958 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 MEX3B-202ENST00000558133 4333 ntBASIC14.31□□□□□ -0.12
CASQ2O14958 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.31□□□□□ -0.12
CASQ2O14958 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.31□□□□□ -0.12
CASQ2O14958 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.31□□□□□ -0.12
CASQ2O14958 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CASQ2O14958 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC14.31□□□□□ -0.12
CASQ2O14958 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.31□□□□□ -0.12
CASQ2O14958 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CASQ2O14958 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.3□□□□□ -0.12
CASQ2O14958 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.3□□□□□ -0.12
CASQ2O14958 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CASQ2O14958 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CASQ2O14958 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CASQ2O14958 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CASQ2O14958 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CASQ2O14958 AL139010.1-201ENST00000454878 894 ntBASIC14.3□□□□□ -0.12
CASQ2O14958 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.3□□□□□ -0.12
CASQ2O14958 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CASQ2O14958 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.3□□□□□ -0.12
CASQ2O14958 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 MIR1199-201ENST00000621445 119 ntBASIC14.3□□□□□ -0.12
CASQ2O14958 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
CASQ2O14958 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.3□□□□□ -0.12
CASQ2O14958 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.3□□□□□ -0.12
CASQ2O14958 CICP16-201ENST00000502609 2813 ntBASIC14.3□□□□□ -0.12
CASQ2O14958 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
CASQ2O14958 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 TP73-203ENST00000357733 4899 ntTSL 5 BASIC14.3□□□□□ -0.12
CASQ2O14958 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CASQ2O14958 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CASQ2O14958 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CASQ2O14958 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CASQ2O14958 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CASQ2O14958 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CASQ2O14958 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CASQ2O14958 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CASQ2O14958 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CASQ2O14958 AC118758.2-201ENST00000614242 2813 ntBASIC14.29□□□□□ -0.12
CASQ2O14958 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms