Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD1O14646 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CHD1O14646 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CHD1O14646 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 API5-203ENST00000455725 2257 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD1O14646 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC23.29■■□□□ 1.32
CHD1O14646 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
CHD1O14646 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC23.29■■□□□ 1.32
CHD1O14646 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC23.29■■□□□ 1.32
CHD1O14646 AC092573.1-201ENST00000433054 884 ntBASIC23.29■■□□□ 1.32
CHD1O14646 AL773545.2-201ENST00000442149 472 ntBASIC23.29■■□□□ 1.32
CHD1O14646 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC23.29■■□□□ 1.32
CHD1O14646 MDH2-205ENST00000461263 648 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD1O14646 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD1O14646 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC23.29■■□□□ 1.32
CHD1O14646 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 SUPT20HL2-201ENST00000486479 2409 ntBASIC23.29■■□□□ 1.32
CHD1O14646 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC23.29■■□□□ 1.32
CHD1O14646 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC23.29■■□□□ 1.32
CHD1O14646 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD1O14646 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC23.29■■□□□ 1.32
CHD1O14646 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD1O14646 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1O14646 AC106820.2-201ENST00000563775 3264 ntBASIC23.29■■□□□ 1.32
CHD1O14646 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CHD1O14646 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CHD1O14646 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CHD1O14646 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1O14646 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1O14646 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1O14646 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC23.28■■□□□ 1.32
CHD1O14646 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1O14646 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CHD1O14646 EEF1DP2-201ENST00000433698 843 ntBASIC23.28■■□□□ 1.32
CHD1O14646 SLC25A15P1-201ENST00000456738 342 ntBASIC23.28■■□□□ 1.32
CHD1O14646 SLC25A15P3-201ENST00000505530 290 ntBASIC23.28■■□□□ 1.32
CHD1O14646 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC23.28■■□□□ 1.32
CHD1O14646 AL009176.1-201ENST00000607876 650 ntBASIC23.28■■□□□ 1.32
CHD1O14646 AC073869.4-201ENST00000620841 800 ntBASIC23.28■■□□□ 1.32
CHD1O14646 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC23.28■■□□□ 1.32
CHD1O14646 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC23.28■■□□□ 1.32
CHD1O14646 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD1O14646 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC23.28■■□□□ 1.32
CHD1O14646 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD1O14646 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1O14646 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1O14646 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD1O14646 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CHD1O14646 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1O14646 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1O14646 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1O14646 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
CHD1O14646 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1O14646 AC087481.3-201ENST00000602886 1894 ntBASIC23.28■■□□□ 1.32
CHD1O14646 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1O14646 FAM226B-201ENST00000602508 1490 ntBASIC23.28■■□□□ 1.32
CHD1O14646 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD1O14646 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CHD1O14646 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD1O14646 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CHD1O14646 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CHD1O14646 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD1O14646 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC23.27■■□□□ 1.32
CHD1O14646 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
CHD1O14646 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CHD1O14646 PCDHA12-202ENST00000613593 2588 ntBASIC23.27■■□□□ 1.32
CHD1O14646 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC23.27■■□□□ 1.32
CHD1O14646 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CHD1O14646 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1O14646 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD1O14646 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CHD1O14646 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1O14646 AC080080.1-201ENST00000625121 2420 ntBASIC23.27■■□□□ 1.32
CHD1O14646 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD1O14646 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD1O14646 AC090616.6-203ENST00000579186 1945 ntBASIC23.27■■□□□ 1.32
CHD1O14646 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1O14646 SNRPCP15-201ENST00000424055 192 ntBASIC23.27■■□□□ 1.32
CHD1O14646 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC23.27■■□□□ 1.32
CHD1O14646 DPY19L2P4-201ENST00000479881 442 ntBASIC23.27■■□□□ 1.32
CHD1O14646 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD1O14646 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC23.27■■□□□ 1.32
CHD1O14646 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CHD1O14646 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC23.27■■□□□ 1.32
CHD1O14646 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC23.27■■□□□ 1.32
CHD1O14646 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CHD1O14646 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1O14646 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CHD1O14646 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC23.27■■□□□ 1.31
CHD1O14646 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1O14646 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms