Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX1O00570 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC15.68■□□□□ 0.1
SOX1O00570 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX1O00570 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC15.68■□□□□ 0.1
SOX1O00570 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC15.68■□□□□ 0.1
SOX1O00570 AC006116.2-201ENST00000589958 988 ntBASIC15.68■□□□□ 0.1
SOX1O00570 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX1O00570 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC15.68■□□□□ 0.1
SOX1O00570 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC15.68■□□□□ 0.1
SOX1O00570 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SOX1O00570 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX1O00570 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SOX1O00570 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.68■□□□□ 0.1
SOX1O00570 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.67■□□□□ 0.1
SOX1O00570 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SOX1O00570 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC15.67■□□□□ 0.1
SOX1O00570 BX088651.3-201ENST00000418155 352 ntBASIC15.67■□□□□ 0.1
SOX1O00570 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.67■□□□□ 0.1
SOX1O00570 AC104961.1-201ENST00000427605 771 ntBASIC15.67■□□□□ 0.1
SOX1O00570 OR2R1P-201ENST00000441404 914 ntBASIC15.67■□□□□ 0.1
SOX1O00570 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SOX1O00570 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.67■□□□□ 0.1
SOX1O00570 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.67■□□□□ 0.1
SOX1O00570 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC15.67■□□□□ 0.1
SOX1O00570 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 AP000920.1-201ENST00000531824 344 ntBASIC15.67■□□□□ 0.1
SOX1O00570 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.67■□□□□ 0.1
SOX1O00570 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SOX1O00570 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SOX1O00570 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.67■□□□□ 0.1
SOX1O00570 AC099398.1-201ENST00000567919 2776 ntBASIC15.67■□□□□ 0.1
SOX1O00570 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.67■□□□□ 0.1
SOX1O00570 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SOX1O00570 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SOX1O00570 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX1O00570 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SOX1O00570 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SOX1O00570 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.66■□□□□ 0.1
SOX1O00570 ALOX12P2-203ENST00000570921 1945 ntBASIC15.66■□□□□ 0.1
SOX1O00570 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SOX1O00570 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.66■□□□□ 0.1
SOX1O00570 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 FUCA1P1-201ENST00000374476 1351 ntBASIC15.66■□□□□ 0.1
SOX1O00570 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SOX1O00570 AL137783.1-201ENST00000623494 1896 ntBASIC15.66■□□□□ 0.1
SOX1O00570 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SOX1O00570 PYY2-201ENST00000315776 282 ntBASIC15.66■□□□□ 0.1
SOX1O00570 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.66■□□□□ 0.1
SOX1O00570 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.66■□□□□ 0.1
SOX1O00570 AC018638.5-201ENST00000450885 754 ntBASIC15.66■□□□□ 0.1
SOX1O00570 RN7SL69P-201ENST00000468423 272 ntBASIC15.66■□□□□ 0.1
SOX1O00570 AC008026.2-201ENST00000495438 348 ntBASIC15.66■□□□□ 0.1
SOX1O00570 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.66■□□□□ 0.1
SOX1O00570 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SOX1O00570 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC15.66■□□□□ 0.1
SOX1O00570 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.66■□□□□ 0.1
SOX1O00570 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 AC006986.1-201ENST00000612764 241 ntBASIC15.66■□□□□ 0.1
SOX1O00570 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.66■□□□□ 0.1
SOX1O00570 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.66■□□□□ 0.1
SOX1O00570 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SOX1O00570 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX1O00570 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SOX1O00570 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SOX1O00570 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms