Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 MYCLP2-201ENST00000449268 967 ntBASIC12.13□□□□□ -0.47
SRRM4A7MD48 AC114812.1-204ENST00000449669 728 ntBASIC12.13□□□□□ -0.47
SRRM4A7MD48 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 AC026434.2-201ENST00000506094 1078 ntBASIC12.13□□□□□ -0.47
SRRM4A7MD48 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 AL391825.1-201ENST00000457671 1364 ntBASIC12.13□□□□□ -0.47
SRRM4A7MD48 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.13□□□□□ -0.47
SRRM4A7MD48 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRRM4A7MD48 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SRRM4A7MD48 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 KLF2P2-201ENST00000416807 1039 ntBASIC12.12□□□□□ -0.47
SRRM4A7MD48 SOCS2P1-201ENST00000417727 557 ntBASIC12.12□□□□□ -0.47
SRRM4A7MD48 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 AC022616.1-201ENST00000518688 554 ntBASIC12.12□□□□□ -0.47
SRRM4A7MD48 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 API5-211ENST00000534695 560 ntTSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 LINC02560-201ENST00000596379 459 ntBASIC12.12□□□□□ -0.47
SRRM4A7MD48 AC004233.3-201ENST00000607794 1269 ntBASIC12.12□□□□□ -0.47
SRRM4A7MD48 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SRRM4A7MD48 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRRM4A7MD48 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms